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PLM3_60_coex_sep16_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_348_1
GWC1_OD1_50_9, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..343)
DNA (342bp) protein (114aa)
Putative uncharacterized protein Tax=uncultured bacterium 2303 RepID=B8R913_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW20729.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Adlerbacteria) bacterium GW2011_GWC1_50_9.;"
PLM3_60_coex_sep16_scaffold_348_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

675..2540
DNA (1866bp) protein (622aa)
ABC-type multidrug transport system, ATPase and permease component Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D976_SINAD
ABC transporter related protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_348_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2524..4347
DNA (1824bp) protein (608aa)
ABC-type multidrug transport system, ATPase and permease component Tax=Singulisphaera acidiphila RepID=L0DAT4_SINAD
ABC transporter related protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_348_4
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(4350..5129)
DNA (780bp) protein (260aa)
Response regulator containing CheY-like receiver,AAA-type ATPase, and DNA-binding domains Tax=Chthonomonas calidirosea T49 RepID=S0EUM1_9BACT
Response regulator containing CheY-like receiver,AAA-type ATPase, and DNA-binding domains
Response regulator containing CheY-like receiver,AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CCW35366.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
PLM3_60_coex_sep16_scaffold_348_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5164..7023)
DNA (1860bp) protein (620aa)
Alginate biosynthesis sensor protein KinB Tax=Chthonomonas calidirosea T49 RepID=S0EYG7_9BACT
Alginate biosynthesis sensor protein KinB
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_348_6
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7202..8680)
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6X7_NITMU
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_348_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(8649..9371)
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM91_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67977.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_60_coex_sep16_scaffold_348_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9605..10114
DNA (510bp) protein (170aa)
PadR family transcriptional regulator bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PadR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_348_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10111..12858
DNA (2748bp) protein (916aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021V1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84274.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_348_10
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12878..13465)
DNA (588bp) protein (196aa)
NADH:ubiquinone oxidoreductase, na Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C7X9_ALCDB
NADH:ubiquinone oxidoreductase, na
NADH:ubiquinone oxidoreductase, na {ECO:0000313|EMBL:AFT68668.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
PLM3_60_coex_sep16_scaffold_348_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13991..15013
DNA (1023bp) protein (341aa)
von Willebrand factor, type A bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
von Willebrand factor type A domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_348_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15312..15686)
DNA (375bp) protein (125aa)
Integral membrane protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SIQ7_NOCSJ
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:ABL81692.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_60_coex_sep16_scaffold_348_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15722..17584)
DNA (1863bp) protein (621aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ82629.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ82629.1};; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_348_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(17661..18869)
DNA (1209bp) protein (403aa)
Nitroreductase Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T6V6_AMYOR
nitroreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_348_15
unknown

Not on your lists

comp(18878..19225)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_348_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19297..21864)
DNA (2568bp) protein (856aa)
TPR repeat-containing serine/threonin protein kinase bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_348_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(21861..22649)
DNA (789bp) protein (263aa)
probable RNA polymerase sigma factor cnrH Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C35E9 bin=ACD66 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_348_18
unknown

Not on your lists

comp(22731..23057)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_348_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23174..23506
DNA (333bp) protein (111aa)
PadR family transcripitonal regulator Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D0D12
transcriptional regulator, PadR-family
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_60_coex_sep16_scaffold_348_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23519..26164
DNA (2646bp) protein (882aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000381B216
permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_348_21
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(26206..27126)
DNA (921bp) protein (307aa)
endo-1,4-beta-xylanase Tax=Streptomyces sp. TOR3209 RepID=UPI000309A710
1,4-beta-xylanase
Tax=RBG_16_Planctomycetes_43_13_curated
PLM3_60_coex_sep16_scaffold_348_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

27307..28098
DNA (792bp) protein (264aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NY0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88640.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_348_23
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28189..29493
DNA (1305bp) protein (435aa)
hypothetical protein Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024847DC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW26504.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
PLM3_60_coex_sep16_scaffold_348_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29550..29996
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DGJ3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61343.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_348_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(30037..33069)
DNA (3033bp) protein (1011aa)
TonB-dependent receptor, plug bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
oar; oar protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_348_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(33345..34280)
DNA (936bp) protein (312aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
VWFA-like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_348_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(34445..37048)
DNA (2604bp) protein (868aa)
Macrolide transporter ATP-binding /permease protein Tax=Gloeobacter kilaueensis JS1 RepID=U5QSA7_9CYAN
macrolide transporter ATP-binding/permease protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_348_28
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(37050..37376)
DNA (327bp) protein (109aa)
Transcriptional regulator, PadR family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025M5_SOLUE
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABJ83294.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_348_29
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(37465..39909)
DNA (2445bp) protein (815aa)
Gll1201 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3_60_coex_sep16_scaffold_348_30

Not on your lists

comp(40153..40701)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=uncultured bacterium RepID=L7Y6P6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGD93297.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 40 in total

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