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PLM3_60_coex_sep16_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_463_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_463_2
unknown

Not on your lists

comp(122..277)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_463_3
unknown

Not on your lists

comp(274..528)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_463_4
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(602..1585)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XWU6_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_60_coex_sep16_scaffold_463_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1710..2528
DNA (819bp) protein (273aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218S0_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87116.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_463_6
unknown

Not on your lists

3124..3471
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_463_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3482..6781)
DNA (3300bp) protein (1100aa)
Uncharacterized protein Tax=Microcoleus sp. PCC 7113 RepID=K9W887_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16443.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM3_60_coex_sep16_scaffold_463_8
unknown

Not on your lists

comp(6798..7631)
DNA (834bp) protein (278aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_463_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

8015..9646
DNA (1632bp) protein (544aa)
hypothetical protein Tax=Methylovulum miyakonense RepID=UPI00037FDFF6
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_463_10
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9662..10201
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8J3_COLFT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK61466.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
PLM3_60_coex_sep16_scaffold_463_11
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10392..10706)
DNA (315bp) protein (105aa)
Small multidrug resistance protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U4H2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KJH71697.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
small multidrug resistance protein
PLM3_60_coex_sep16_scaffold_463_12
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10747..11904)
DNA (1158bp) protein (386aa)
Diaminopimelate decarboxylase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TM74_PHAFV
Diaminopimelate decarboxylase {ECO:0000313|EMBL:EPY03366.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
diaminopimelate decarboxylase
PLM3_60_coex_sep16_scaffold_463_13

Not on your lists

comp(11956..12207)
DNA (252bp) protein (84aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEF4_GEMAT
Marine sediment metagenome DNA, contig: S01H1_L05904 {ECO:0000313|EMBL:GAF68675.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_463_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12330..13367)
DNA (1038bp) protein (346aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBN2_NITMU
Uncharacterized protein {ECO:0000313|EMBL:GAO35414.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_463_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13456..15309
DNA (1854bp) protein (618aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3T2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95795.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM3_60_coex_sep16_scaffold_463_16
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15437..15865
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Novosphingobium sp. AP12 RepID=J2Q4K2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL35107.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_463_17
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15882..17180
DNA (1299bp) protein (433aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003782D8C
Uncharacterized protein {ECO:0000313|EMBL:GAO35413.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_463_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17180..18691
DNA (1512bp) protein (504aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000366AB55
Peroxidase {ECO:0000313|EMBL:GAO35412.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
peroxidase
PLM3_60_coex_sep16_scaffold_463_19
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

18710..21235
DNA (2526bp) protein (842aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium RepID=F2YWX0_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEA09230.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_463_20
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

21241..23295
DNA (2055bp) protein (685aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00035F0520
peptidase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3_60_coex_sep16_scaffold_463_21
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23363..23899)
DNA (537bp) protein (179aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Phosphoesterase bin=GWB2_Desulfobacterales_56_26 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
phosphodiesterase, MJ0936 family
PLM3_60_coex_sep16_scaffold_463_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(23892..25658)
DNA (1767bp) protein (589aa)
Amidase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AN5_SOLUE
amidase
Amidase {ECO:0000313|EMBL:ABJ81881.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_463_23
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25988..26812
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DS5_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43317.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM3_60_coex_sep16_scaffold_463_24
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

27323..27691
DNA (369bp) protein (123aa)
Dgpfaetke family protein {ECO:0000313|EMBL:KIF12946.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
YCII-related protein bin=GWA2_Methylomirabilis_73_35 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
PLM3_60_coex_sep16_scaffold_463_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27684..28940
DNA (1257bp) protein (419aa)
RNA polymerase sigma70 factor {ECO:0000313|EMBL:GAN45450.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Putative RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative RNA polymerase sigma factor containing a TPR repeat domain
PLM3_60_coex_sep16_scaffold_463_26

Not on your lists

28966..29838
DNA (873bp) protein (291aa)
Class B beta-lactamase Tax=uncultured bacterium RepID=L7Y8A1_9BACT
Class B beta-lactamase {ECO:0000313|EMBL:AGD93294.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-lactamase domain-containing protein
PLM3_60_coex_sep16_scaffold_463_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30401..31195
DNA (795bp) protein (265aa)
Putative uncharacterized protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NRB6_CHRVO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_463_28
unknown

Not on your lists

31188..32129
DNA (942bp) protein (314aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_463_29
unknown

Not on your lists

32645..32800
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_463_30
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32803..33315
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Bacillus cereus VD131 RepID=R8L8L4_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOP17973.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD131.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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