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PLM3_60_coex_sep16_scaffold_220_22

Organism: PLM3_60_coex_sep16_Acidobacteria_65_11

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 14147..16156

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system, TraD, DNA-binding domain protein Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NT31_GRAMM similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 655.0
  • Bit_score: 458
  • Evalue 8.70e-126
Type IV secretion system, TraD, DNA-binding domain protein similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 655.0
  • Bit_score: 458
  • Evalue 2.50e-126
Type IV secretion system, TraD, DNA-binding domain protein {ECO:0000313|EMBL:AEU37461.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 655.0
  • Bit_score: 458
  • Evalue 1.20e-125

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Taxonomy

Granulicella mallensis → Granulicella → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2010
ATGGCGGGCCAAAAGAGCTGGGCGGAGGGTCGCTGGTGGCGTGGAGCGAAGCGCGACTACTTGGGAGCCGTGGTGCTGGCGGTATTGCTTGTCTTCGGCTTCCACGTCCTCACGCTTCGGCAACTGACCGCACCGCCTCTTCAGCAGTACTACATTGACGCCTATCGGAGCAGTTGCTCGGTCGTACGCCGGCCGATCGTCCTCCCTTACGTTCAACGATCGAACGGCAATCGCACTCTCGCCTCGATCGCCGATGTCGTTGTGCTGCCTTCGTCCCCTTCTGGGACACTCCGGCTCATGCTCTCAAAGCCGGCGATCGGCGCCGGAGCCAAGCGCCTCGAGTTCCTCCGGACGTCTGGAGACGGACCAGACCGGGCCTGCGCCAGCCTGGAAGCGCAGATTCAGGCGAACCGGGCTGGTATCCGCACCAGGATTCCACCGCAGATACTCGGCATGCTCGCGCTGGGCATTGTCGCGTTCGTGGTCAGCGTGCTCGATTATCGCAGGTCCGGCCGGGCAATGCGGCGCGGACACACTCTGCGAGGCCCTGAACTCCTAACGAGGGAAAAGTTCAATCGAGTTAAGCAAGCGGACGGCATCGGATTCTTGACCGACGAGGGATCTTCACTCCGGACGCTGATAGGCGGCTCCGGTGGACGGGGGCCGCTTTCAATTCGTCGGCAGGAGGAAAGCAGCCATTTCTTGCTGATGGGCGACACCGGAACCGGAAAGTCATCGCTGATCCGCCAGATGCTCGAGCAGGTTGCCGATCGCAACGAGGCGGCCATCGTCTACGATCCGGCGCTTGAGTTCACGCCGCAGTTCTACAGGCCAGAACGCGGCGACCAGATCCTGAACCCGCTTGACACACGCATGCCCTTTTGGTCGCCCGGAGACGAGATTCAGCACCGGGCTGAAGCGCTGGCGTTCGCCAAGGCTCTCTTTCCCGATGACCGTCGCGACAACAGATTCTTCATCGAGAGTCCCCGCAAGATCTTTGCTCGGCTGCTCTCATTCAGGCCGACCGCCCAGGAGATCGCGCACTGGCTTCAGCATCACGGTGAGATCGATCGGCTGGTCGATGGGACGGAGCTCGCGTCAATGATCGACCCCGGAGCGCCATCCCAACGCGCTGGCGTGCTCGCGTCCCTGAGCATGGTCGGCGATTCTTTCCAGCTCATTCCAGAGCGGGCCGAGACGACCGGGAATTGGAGCGCCAACGATTGGGCGAAGCACCGCAAGGGCTGGATCTTCCTCACGTCGACACCGCAGACGCTCGATCGACTGCGGCCCCTGATCACCGTCTGGCTGGACCTTCTCCTCACGCGTCTGCTCTCCGGCGGTGAGCCTGTGTGGGTTTTCCTGGACGAGCTGCCAACGCTCAATAAGCTGCCGAAACTGCCCGACGCGCTCGCTTTGGCGCGTAAACCGAATGTGCGTTTAGTCCTCGGATTTCAGGGCCGGGCACAGTTGGAGGCTAAGTATCAGACCGAGTCAGAGGCGATGCTGTCCCAGCCAGGGACCAAGGTATTCCTGAGGACCAGCGAGCCGAGGGCCGCCGAGTGGATAAGCAAGGCGCTGGGAGAAATTGAGTTCGAGCGCCTGCGCGAGTCCGTGAATTACGACAAGTACTTTCCGATGCTCTACCACCGCAAGGGGCATGGATACTCGCTGGATCGTCAGACGAAGCCCCTCGTGCTGGCGTCAGAGATCACCGGCTTGAGTAACTTGGCCGGTTATCTGAAATCCGAGAACTACGTCGTCAGGTTTCGGTTCAAACCGAATCCTGTTCAGAAACTGCAGCCAGCTCTGCTACCTCGCCCGGTCAGCTCGAAGGACTGGCCTCAGCGACCGCCATCCGAGGCATCATCGACACGCAATGACCAGCGCGGTCAGTTGGCGACGTCGAGCGCAAACCGCGGCCATCGTCTCAGACCCCAACCACGCCGGGATGTGCCCCAGCGCAGCCGACCAGACCCTGCAGTCGAACGTGATCCGTACTTCGAGTGA
PROTEIN sequence
Length: 670
MAGQKSWAEGRWWRGAKRDYLGAVVLAVLLVFGFHVLTLRQLTAPPLQQYYIDAYRSSCSVVRRPIVLPYVQRSNGNRTLASIADVVVLPSSPSGTLRLMLSKPAIGAGAKRLEFLRTSGDGPDRACASLEAQIQANRAGIRTRIPPQILGMLALGIVAFVVSVLDYRRSGRAMRRGHTLRGPELLTREKFNRVKQADGIGFLTDEGSSLRTLIGGSGGRGPLSIRRQEESSHFLLMGDTGTGKSSLIRQMLEQVADRNEAAIVYDPALEFTPQFYRPERGDQILNPLDTRMPFWSPGDEIQHRAEALAFAKALFPDDRRDNRFFIESPRKIFARLLSFRPTAQEIAHWLQHHGEIDRLVDGTELASMIDPGAPSQRAGVLASLSMVGDSFQLIPERAETTGNWSANDWAKHRKGWIFLTSTPQTLDRLRPLITVWLDLLLTRLLSGGEPVWVFLDELPTLNKLPKLPDALALARKPNVRLVLGFQGRAQLEAKYQTESEAMLSQPGTKVFLRTSEPRAAEWISKALGEIEFERLRESVNYDKYFPMLYHRKGHGYSLDRQTKPLVLASEITGLSNLAGYLKSENYVVRFRFKPNPVQKLQPALLPRPVSSKDWPQRPPSEASSTRNDQRGQLATSSANRGHRLRPQPRRDVPQRSRPDPAVERDPYFE*