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PLM3_60_coex_sep16_scaffold_22577

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_22577_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..314
DNA (312bp) protein (104aa)
Extracellular solute-binding protein family 5 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptide ABC transporter
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_60_coex_sep16_scaffold_22577_2
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(327..1292)
DNA (966bp) protein (322aa)
membrane protein Tax=Polaribacter franzmannii RepID=UPI0003664F30
Conserved hypothetical membrane protein, EamA-like transporter family {ECO:0000313|EMBL:KGL62960.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
integral membrane protein DUF6
PLM3_60_coex_sep16_scaffold_22577_3
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1467..2819)
DNA (1353bp) protein (451aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W592_DESAS
amidohydrolase
PLM3_60_coex_sep16_scaffold_22577_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2845..3825)
DNA (981bp) protein (327aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_22577_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3984..4292
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_22577_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4351..5307)
DNA (957bp) protein (319aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_22577_7
unknown

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comp(5343..5432)
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_22577_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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5497..5826
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_22577_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5835..6491
DNA (657bp) protein (219aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_22577_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6902..7846)
DNA (945bp) protein (315aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_22577_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7857..8423)
DNA (567bp) protein (189aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 11 items

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