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PLM3_60_coex_sep16_scaffold_33200

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_33200_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105..1103)
DNA (999bp) protein (333aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_33200_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1124..1540)
DNA (417bp) protein (139aa)
maleate cis-trans isomerase bin=GWD2_Deltaproteobacteria_55_8 species=Thermococcus zilligii genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_33200_3
unknown

Not on your lists

1705..1863
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_33200_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2211..2597
DNA (387bp) protein (129aa)
Signal transduction response regulator bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_33200_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2539..2988
DNA (450bp) protein (150aa)
Signal transduction response regulator bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_33200_6
unknown

Not on your lists

comp(3381..3791)
DNA (411bp) protein (137aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_33200_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3733..4281)
DNA (549bp) protein (183aa)
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
PLM3_60_coex_sep16_scaffold_33200_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(4278..5024)
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Anabaena sp. 90 RepID=K7WSE5_9NOST
TIGR04255 family protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
PLM3_60_coex_sep16_scaffold_33200_9
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5230..5550)
DNA (321bp) protein (107aa)
Twin-arginine translocation pathway signal protein Tax=Advenella kashmirensis W13003 RepID=V8QTQ6_9BURK
twin-arginine translocation pathway signal
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_60_coex_sep16_scaffold_33200_10
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5547..6035)
DNA (489bp) protein (163aa)
Twin-arginine translocation pathway signal protein Tax=Advenella kashmirensis W13003 RepID=V8QMC6_9BURK
twin-arginine translocation pathway signal
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_60_coex_sep16_scaffold_33200_11
unknown

Not on your lists

comp(6038..6205)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_33200_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6229..6636)
DNA (408bp) protein (136aa)
PilT protein domain protein Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0W5_DESAP
PilT domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_33200_13
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(6611..6871)
DNA (261bp) protein (87aa)
Tax=RBG_13_Aminicenantes_59_9_curated
PLM3_60_coex_sep16_scaffold_33200_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6993..7433)
DNA (441bp) protein (147aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002E34575
Uncharacterized protein {ECO:0000313|EMBL:ETW98447.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_33200_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7430..8962)
DNA (1533bp) protein (511aa)
Uncharacterized protein Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLD1_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:ETX01816.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_33200_16
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9362..10168
DNA (807bp) protein (269aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_33200_17
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10345..10899
DNA (555bp) protein (185aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI00036DDD80
Recombinase {ECO:0000313|EMBL:KKA37618.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
eutA; Ethanolamine utilization protein eutA
PLM3_60_coex_sep16_scaffold_33200_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10893..11888
DNA (996bp) protein (332aa)
hypothetical protein Tax=Massilia niastensis RepID=UPI00036DDD80
eutA; Ethanolamine utilization protein eutA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_60_coex_sep16_scaffold_33200_19
unknown

Not on your lists

comp(12133..12285)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_33200_20
unknown

Not on your lists

12347..12448
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 20 items

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