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PLM3_60_coex_sep16_scaffold_3496

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3496_1
unknown

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1..312
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3496_2
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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416..1048
DNA (633bp) protein (211aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Dephospho-CoA kinase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YA54_THEBD
PLM3_60_coex_sep16_scaffold_3496_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1106..1843
DNA (738bp) protein (246aa)
Hydrolase Tax=Paenibacillus mucilaginosus K02 RepID=I0BCW0_9BACL
hydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_3496_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1843..2709
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVW8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84351.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3496_5
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

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comp(2818..4098)
DNA (1281bp) protein (427aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase bin=GWF1_Spirochaetes_60_12 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_60_80_curated
PLM3_60_coex_sep16_scaffold_3496_6
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4298..6352
DNA (2055bp) protein (685aa)
UvrABC system protein B Tax=Frankia sp. QA3 RepID=I8QFA4_9ACTO
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
uvrB; excinuclease ABC subunit B
PLM3_60_coex_sep16_scaffold_3496_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6484..8385
DNA (1902bp) protein (634aa)
Cell division protein FtsI Tax=Cystobacter fuscus DSM 2262 RepID=S9P3V2_9DELT
Penicillin-binding protein {ECO:0000313|EMBL:KFA89274.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
putative penicillin-binding protein
PLM3_60_coex_sep16_scaffold_3496_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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8787..9143
DNA (357bp) protein (119aa)
Ornithine cyclodeaminase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AV79_STRRD
ornithine cyclodeaminase
Ornithine cyclodeaminase {ECO:0000313|EMBL:ACZ88730.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_3496_9
unknown

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comp(9203..9610)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3496_10
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9658..10323)
DNA (666bp) protein (222aa)
Zn-dependent hydrolase, glyoxylase Tax=Saccharomonospora marina XMU15 RepID=H5WXQ8_9PSEU
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EHR51717.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
metallo-beta-lactamase superfamily protein
PLM3_60_coex_sep16_scaffold_3496_11
actinobacterium acIB-AMD-6, Actinobacteria, Actinobacteria, Bacteria

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10435..10644
DNA (210bp) protein (70aa)
excinuclease ABC subunit A Tax=actinobacterium SCGC AAA278-I18 RepID=UPI000361716C
uvrA; excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Actinobacteria.;" source="actinobacterium acIB-AMD-6.;"
Displaying 11 items

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