ggKbase home page

PLM3_60_coex_sep16_scaffold_3993

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3993_1
unknown

Not on your lists

comp(2..790)
DNA (789bp) protein (263aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3993_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(795..1382)
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5W7_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX05760.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_60_coex_sep16_scaffold_3993_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1580..1840)
DNA (261bp) protein (87aa)
Putative transglycosylase associated protein Tax=Frankia sp. (strain EuI1c) RepID=E3J586_FRASU
transglycosylase associated protein
Putative transglycosylase associated protein {ECO:0000313|EMBL:ADP80684.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_3993_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1955..2377)
DNA (423bp) protein (141aa)
dynein regulation protein LC7 Tax=Streptomyces scabrisporus RepID=UPI000362E771
Uncharacterized protein {ECO:0000313|EMBL:EXG79196.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Roadblock/LC7 family protein
PLM3_60_coex_sep16_scaffold_3993_5
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2563..3003
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SAA4_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV85219.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM3_60_coex_sep16_scaffold_3993_6
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3000..3728)
DNA (729bp) protein (243aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase Tax=Rhodococcus opacus RepID=Q8G9L2_RHOOP
Dienelactone hydrolase family protein {ECO:0000313|EMBL:KJF24633.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
PLM3_60_coex_sep16_scaffold_3993_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3775..5115)
DNA (1341bp) protein (447aa)
peptidase S8 Tax=Frankia sp. Iso899 RepID=UPI0003B605A5
Peptidase S8 and S53, subtilisin, kexin {ECO:0000313|EMBL:EON22647.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM3_60_coex_sep16_scaffold_3993_8
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5240..7825
DNA (2586bp) protein (862aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5V0E0_STRCU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS73053.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
PLM3_60_coex_sep16_scaffold_3993_9
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7956..8117)
DNA (162bp) protein (54aa)
Transcriptional regulator, LuxR family (Fragment) Tax=Streptomyces turgidiscabies Car8 RepID=L7ER97_9ACTO
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ELP61542.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
LuxR family transcriptional regulator
Displaying 9 items

View Taxonomy