ggKbase home page

PLM3_60_coex_sep16_scaffold_11166

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_11166_1
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..709)
DNA (708bp) protein (236aa)
Molybdopterin dehydrogenase FAD-binding protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFU5_HALO1
FAD-binding molybdopterin dehydrogenase protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ACY14547.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3_60_coex_sep16_scaffold_11166_2
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(978..1679)
DNA (702bp) protein (234aa)
Carbon monoxide dehydrogenase subunit G Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVE8_ACIC1
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:ABK53408.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_11166_3
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1676..2323)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Streptomyces sp. CNY228 RepID=UPI00035EEDCD
4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000313|EMBL:KJS52941.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
YgfJ family molybdenum hydroxylase accessory protein
PLM3_60_coex_sep16_scaffold_11166_4
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2395..3171)
DNA (777bp) protein (259aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LDN2_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW15540.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_11166_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(3176..3487)
DNA (312bp) protein (104aa)
Putative xanthine dehydrogenase accessory factor subfamily, putative Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1F2_THERP
putative xanthine dehydrogenase accessory factor subfamily
Putative xanthine dehydrogenase accessory factor subfamily, putative {ECO:0000313|EMBL:ACM04705.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_60_coex_sep16_scaffold_11166_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3700..4200
DNA (501bp) protein (167aa)
(2Fe-2S)-binding domain-containing protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGF2_THEM7
Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_11166_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4197..6542
DNA (2346bp) protein (782aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABG03091.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABG03091.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZT7_RUBXD
PLM3_60_coex_sep16_scaffold_11166_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6539..7381
DNA (843bp) protein (281aa)
Molybdopterin dehydrogenase, FAD-binding protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZT6_RUBXD
molybdopterin dehydrogenase protein
Molybdopterin dehydrogenase, FAD-binding protein {ECO:0000313|EMBL:ABG03092.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_11166_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7413..8279
DNA (867bp) protein (289aa)
ATPase associated with various cellular activities AAA_5 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D011_PSEUX
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEA24844.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM3_60_coex_sep16_scaffold_11166_10
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8382..9383
DNA (1002bp) protein (334aa)
Carbon monoxide accessory protein containing a VWA domain Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKH9_BLASD
coxE; carbon monoxide accessory protein containing a VWA domain
Carbon monoxide accessory protein containing a VWA domain {ECO:0000313|EMBL:CCG02398.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_11166_11
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9438..9890
DNA (453bp) protein (151aa)
hypothetical protein Tax=Lewinella persica RepID=UPI00036AC805
Molybdopterin converting factor, large subunit {ECO:0000313|EMBL:EKP95056.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
molybdopterin converting factor subunit 1
PLM3_60_coex_sep16_scaffold_11166_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10186..10617
DNA (432bp) protein (144aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036B96D9
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADB50317.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_11166_13
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10568..11365)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI00036463B0
SmtA protein {ECO:0000313|EMBL:BAQ46152.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_11166_14
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11560..12129
DNA (570bp) protein (190aa)
Secreted protein Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QU82_MYCS2
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH47145.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis.;"
PLM3_60_coex_sep16_scaffold_11166_15
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12126..13121
DNA (996bp) protein (332aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI00036A8D01
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46942.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_60_coex_sep16_scaffold_11166_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

13297..14772
DNA (1476bp) protein (492aa)
Hydroxymethylpyrimidine transporter CytX Tax=uncultured prokaryote RepID=H5SLW1_9ZZZZ
putative hydroxymethylpyrimidine transporter CytX
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_60_coex_sep16_scaffold_11166_17
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14711..15031)
DNA (321bp) protein (107aa)
Cupin 2, conserved barrel bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cupin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_11166_18
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15138..15422
DNA (285bp) protein (95aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y970_THEBD
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Displaying 18 items

View Taxonomy