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PLM3_60_coex_sep16_scaffold_5289

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5289_1
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1183)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037DACB0
Histidine kinase {ECO:0000313|EMBL:KDS86546.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
histidine kinase
PLM3_60_coex_sep16_scaffold_5289_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(1270..1881)
DNA (612bp) protein (204aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4A1_SPHTD
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ACZ39068.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_5289_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1929..2615)
DNA (687bp) protein (229aa)
ATP-dependent Clp protease proteolytic subunit Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037ACF85
ATP-dependent Clp protease, proteolytic subunit ClpP
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5289_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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2796..3275
DNA (480bp) protein (160aa)
hypothetical protein bin=bin9_gal15 species=Maricaulis maris genus=Maricaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
PLM3_60_coex_sep16_scaffold_5289_5
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3265..3978
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PLP9_MEIRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK05409.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
PLM3_60_coex_sep16_scaffold_5289_6
unknown

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3988..4266
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5289_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(4260..4700)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTP1_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52801.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_5289_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4776..5516)
DNA (741bp) protein (247aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00035C146F
Transcriptional regulator GntR family {ECO:0000313|EMBL:EHN12756.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
GntR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_5289_9
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5659..6048
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0K6_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ81402.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM3_60_coex_sep16_scaffold_5289_10
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6098..6913)
DNA (816bp) protein (272aa)
ABC transporter related Tax=Frankia sp. (strain EAN1pec) RepID=A8L079_FRASN
ABC transporter-like protein
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3_60_coex_sep16_scaffold_5289_11
unknown

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7162..7479
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5289_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7807..8772)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000373BDB2
appF; Oligopeptide transport ATP-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5289_13
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8769..9779)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00035D5DD5
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KJY42586.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
peptide ABC transporter ATPase
PLM3_60_coex_sep16_scaffold_5289_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9813..10796)
DNA (984bp) protein (328aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000381D95E
peptide transport system permease protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5289_15
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10875..12617)
DNA (1743bp) protein (581aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036DE18A
Uncharacterized protein {ECO:0000313|EMBL:EWT07934.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
appA; dipeptide-binding lipoprotein
PLM3_60_coex_sep16_scaffold_5289_16
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12795..13598)
DNA (804bp) protein (268aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000374DE81
ABC transporter permease {ECO:0000313|EMBL:EWT07931.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
appC; oligopeptide transport system permease AppC
Displaying 16 items

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