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PLM3_60_coex_sep16_scaffold_4044

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4044_1
unknown

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comp(1..210)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4044_2
unknown

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comp(506..1087)
DNA (582bp) protein (194aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4044_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(1137..4055)
DNA (2919bp) protein (973aa)
binding-protein-dependent transporter inner membrane component bin=bin8_Chloro species=Actinoplanes friuliensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
binding-protein-dependent transporter inner membrane component
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_4044_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4105..5187)
DNA (1083bp) protein (361aa)
opuAA5; Glycine betaine transport ATP-binding protein OpuAA (EC:3.6.3.32) bin=bin8_Chloro species=Streptomyces afghaniensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Glycine/betaine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK35856.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
glycine betaine/proline ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_4044_5
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5175..8195)
DNA (3021bp) protein (1007aa)
Oxidoreductase Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L4V8_9ACTO
Oxidoreductase {ECO:0000313|EMBL:EST38711.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
oxidoreductase
PLM3_60_coex_sep16_scaffold_4044_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8358..8816
DNA (459bp) protein (153aa)
FAD dependent oxidoreductase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXZ8_RUBXD
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABG03730.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_4044_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8759..10696
DNA (1938bp) protein (646aa)
sarcosine dehydrogenase Tax=Streptomyces rapamycinicus RepID=UPI0003830908
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AHY45911.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_4044_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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10716..11909
DNA (1194bp) protein (398aa)
glycine cleavage system protein T Tax=Saccharopolyspora spinosa RepID=UPI0002379DAF
Glycine cleavage system T protein (aminomethyltransferase)
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AHY45912.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_4044_9
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11957..12808
DNA (852bp) protein (284aa)
Methylenetetrahydrofolate reductase Tax=Streptomyces viridochromogenes Tue57 RepID=L8P2I6_STRVR
5,10-methylenetetrahydrofolate reductase
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:AJF69066.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3_60_coex_sep16_scaffold_4044_10
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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12814..14007
DNA (1194bp) protein (398aa)
Aminomethyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYT4_RUBXD
Glycine cleavage system T protein (aminomethyltransferase)
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AHY45915.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_4044_11
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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14019..15359
DNA (1341bp) protein (447aa)
Sarcosine oxidase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXZ2_RUBXD
Glycine/D-amino acid oxidases (deaminating)
Glycine/D-amino acid oxidases (Deaminating) {ECO:0000313|EMBL:AHY45916.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_60_coex_sep16_scaffold_4044_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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15384..16172
DNA (789bp) protein (263aa)
IclR family transcriptional regulator Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATQ1_STRRD
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:ETK31492.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM3_60_coex_sep16_scaffold_4044_13
unknown

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16237..16647
DNA (411bp) protein (137aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4044_14
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16644..18713)
DNA (2070bp) protein (690aa)
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
DNA ligase Tax=Frankia alni (strain ACN14a) RepID=DNLJ_FRAAA
PLM3_60_coex_sep16_scaffold_4044_15
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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18845..21073
DNA (2229bp) protein (743aa)
Uncharacterized protein Tax=Streptomyces lividans RepID=S1SV06_STRLI
Putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIJ12053.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM3_60_coex_sep16_scaffold_4044_16
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

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21123..21935
DNA (813bp) protein (271aa)
HAD family hydrolase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627A07
Uncharacterized protein {ECO:0000313|EMBL:KIE50717.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
Cof-like hydrolase
PLM3_60_coex_sep16_scaffold_4044_17
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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22141..22293
DNA (153bp) protein (51aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003650F10
Major facilitator superfamily MFS_1 permease {ECO:0000313|EMBL:CCH18084.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
major facilitator transporter
Displaying 17 items

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