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PLM3_60_coex_sep16_scaffold_4183

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4183_1
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..978
DNA (978bp) protein (326aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000379AE7E
Uncharacterized protein {ECO:0000313|EMBL:KIX18774.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
sll1726; hypothetical protein
PLM3_60_coex_sep16_scaffold_4183_2
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1030..1608
DNA (579bp) protein (193aa)
Transcriptional regulator, ArsR family Tax=Amycolatopsis azurea DSM 43854 RepID=M2QGY4_9PSEU
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EMD25956.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
ArsR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_4183_3
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1605..4730
DNA (3126bp) protein (1042aa)
hypothetical protein Tax=Streptomyces sp. ATexAB-D23 RepID=UPI00037A019E
Transporter {ECO:0000313|EMBL:KDQ68719.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
major facilitator superfamily protein
PLM3_60_coex_sep16_scaffold_4183_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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4837..5550
DNA (714bp) protein (238aa)
UPI0003CEE188 related cluster Tax=unknown RepID=UPI0003CEE188
SMP-30/gluconolaconase/LRE-like region-containing protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_4183_5
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5560..6750)
DNA (1191bp) protein (397aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YWB0_NOCFA
Putative AP superfamily protein {ECO:0000313|EMBL:CDO09026.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4183_6
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6869..8101
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYH0_PELTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF60953.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
PLM3_60_coex_sep16_scaffold_4183_7
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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8149..9090
DNA (942bp) protein (314aa)
Rhomboid family protein Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3TQX7_9ACTO
protease
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_4183_8
unknown

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comp(9033..9140)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4183_9
unknown

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comp(9149..9853)
DNA (705bp) protein (235aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4183_10
Amycolatopsis halophila, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9936..11009
DNA (1074bp) protein (358aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis halophila YIM 93223.;"
selD; selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SDM2_ACTS5
PLM3_60_coex_sep16_scaffold_4183_11
CSP1_5_NC10, NC10, Bacteria

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11114..11536
DNA (423bp) protein (141aa)
Mov34/MPN/PAD-1 family protein bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
Mov34/MPN/PAD-1
Tax=CSP1_5_NC10
PLM3_60_coex_sep16_scaffold_4183_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11592..11876
DNA (285bp) protein (95aa)
Moad family protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F7D5_VERMA
moad family protein
Moad family protein {ECO:0000313|EMBL:AEB43193.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_60_coex_sep16_scaffold_4183_13
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11882..12766
DNA (885bp) protein (295aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000313|EMBL:KEI43431.1}; EC=2.5.1.47 {ECO:0000313|EMBL:KEI43431.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
Cysteine synthase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVJ9_ACIC1
PLM3_60_coex_sep16_scaffold_4183_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12711..13670
DNA (960bp) protein (320aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Glutamate racemase Tax=Frankia sp. (strain EuI1c) RepID=E3IX19_FRASU
PLM3_60_coex_sep16_scaffold_4183_15
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13667..14455
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QU27_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN72053.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SC66T3.08c; hypothetical protein
PLM3_60_coex_sep16_scaffold_4183_16
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

14452..15258
DNA (807bp) protein (269aa)
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH Tax=Isoptericola variabilis (strain 225) RepID=F6FQE0_ISOV2
Tax=RBG_13_Actinobacteria_55_18_curated
PLM3_60_coex_sep16_scaffold_4183_17
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15255..15959
DNA (705bp) protein (235aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
Non-canonical purine NTP pyrophosphatase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPQ9_9FIRM
HAM1 protein
PLM3_60_coex_sep16_scaffold_4183_18
unknown

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comp(15978..16307)
DNA (330bp) protein (110aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B6A58E
PLM3_60_coex_sep16_scaffold_4183_19
unknown

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comp(16331..17836)
DNA (1506bp) protein (502aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B6A58E
PLM3_60_coex_sep16_scaffold_4183_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18707..19594)
DNA (888bp) protein (296aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00036C138E
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:GAD21049.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4183_21
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(19587..20399)
DNA (813bp) protein (271aa)
Putative ABC transporter transmembrane subunit Tax=Streptomyces scabies (strain 87.22) RepID=C9Z2J6_STRSW
ABC transporter
Putative ABC transporter transmembrane subunit {ECO:0000313|EMBL:CBG72707.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
PLM3_60_coex_sep16_scaffold_4183_22
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20396..20737)
DNA (342bp) protein (114aa)
XRE family transcriptional regulator Tax=Frankia sp. BMG5.12 RepID=UPI000369527B
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABW14494.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying 22 items

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