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PLM3_60_coex_sep16_scaffold_2673

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2673_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1..405
DNA (405bp) protein (135aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2673_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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444..2120
DNA (1677bp) protein (559aa)
ctaD1-2; putative cytochrome c oxidase subunit 1-alpha (EC:1.9.3.1)
Cytochrome c oxidase subunit I bin=GWC2_Chloroflexi_73_18 species=Rhodococcus qingshengii genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_2673_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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2120..2737
DNA (618bp) protein (206aa)
cytochrome c oxidase, subunit III bin=GWC2_Chloroflexi_73_18 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cytochrome c oxidase subunit III
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_2673_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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2753..4162
DNA (1410bp) protein (470aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4M5_THERP
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACM06768.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3_60_coex_sep16_scaffold_2673_5
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4185..5033)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000382D088
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AJE84410.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
PLM3_60_coex_sep16_scaffold_2673_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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comp(5211..5324)
DNA (114bp) protein (38aa)
polyphosphate kinase Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B69277
polyphosphate kinase 2, PA0141 family
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_2673_7
unknown

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5510..5725
DNA (216bp) protein (72aa)
Putative transcriptional regulator Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V3P9_9PSEU
PLM3_60_coex_sep16_scaffold_2673_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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5834..7687
DNA (1854bp) protein (618aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRJ8_ACIC1
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABK52058.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_2673_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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7684..8763
DNA (1080bp) protein (360aa)
2-oxoacid ferredoxin oxidoreductase subunit beta Tax=Streptomyces scabrisporus RepID=UPI000371F8B2
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Thiamine pyrophosphate enzyme domain protein TPP-binding protein {ECO:0000313|EMBL:ABK52057.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_2673_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8748..9989
DNA (1242bp) protein (414aa)
ribonuclease D (EC:3.1.13.5)
Ribonuclease D {ECO:0000313|EMBL:ADB53805.1}; EC=3.1.13.5 {ECO:0000313|EMBL:ADB53805.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribonuclease D Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZG7_CONWI
PLM3_60_coex_sep16_scaffold_2673_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10012..11046)
DNA (1035bp) protein (345aa)
Putative transmembrane transport protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LBT2_FRASN
putative transmembrane transport protein
Putative transmembrane transport protein {ECO:0000313|EMBL:ABW12450.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_2673_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(11043..11951)
DNA (909bp) protein (303aa)
ABC transport system ATP-binding protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L040_9ACTO
ABC transport system ATP-binding protein {ECO:0000313|EMBL:CCH17187.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
ABC transporter-like protein
PLM3_60_coex_sep16_scaffold_2673_13
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11948..12340)
DNA (393bp) protein (131aa)
Transcriptional regulator, GntR family Tax=Frankia sp. (strain EAN1pec) RepID=A8L8X4_FRASN
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABW10797.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_2673_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(12447..13310)
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U491_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81321.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2673_15
unknown

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comp(13388..13831)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2673_16
unknown

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14084..14368
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2673_17
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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14365..16095
DNA (1731bp) protein (577aa)
Putative uncharacterized protein Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5USS3_9MICO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB48781.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
Displaying 17 items

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