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PLM3_60_coex_sep16_scaffold_2885

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2885_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1..729
DNA (729bp) protein (243aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036BFE8B
Phenylacetic acid-responsive transcriptional repressor {ECO:0000313|EMBL:EXG81019.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PaaX family transcriptional regulator
PLM3_60_coex_sep16_scaffold_2885_2
unknown

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comp(1738..1845)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2885_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2300..2725)
DNA (426bp) protein (142aa)
hypothetical protein Tax=Nocardiopsis baichengensis RepID=UPI00034D7A54
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK53239.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_2885_4
unknown

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comp(2772..3011)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2885_5
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(3041..4777)
DNA (1737bp) protein (579aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWR5_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN00769.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3_60_coex_sep16_scaffold_2885_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4881..5375
DNA (495bp) protein (165aa)
MerR family transcriptional regulator Tax=Streptomyces sp. BoleA5 RepID=UPI00037E0C17
soxR; Redox-sensitive transcriptional activator SoxR
Redox-sensitive transcriptional activator SoxR {ECO:0000313|EMBL:ADO67867.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3_60_coex_sep16_scaffold_2885_7
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5452..6099
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
Adenylate kinase Tax=Frankia sp. EUN1f RepID=D3CWY8_9ACTO
adenylate kinase
PLM3_60_coex_sep16_scaffold_2885_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6218..7393
DNA (1176bp) protein (392aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:ACY98020.1}; EC=1.14.13.2 {ECO:0000313|EMBL:ACY98020.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
4-hydroxybenzoate 3-monooxygenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3W7_THECD
PLM3_60_coex_sep16_scaffold_2885_9
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7428..8261
DNA (834bp) protein (278aa)
Putative CoA transferase A subunit Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YTX4_NOCFA
CoA transferase A subunit
Putative CoA transferase A subunit {ECO:0000313|EMBL:BAD58367.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM3_60_coex_sep16_scaffold_2885_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8270..9055
DNA (786bp) protein (262aa)
3-oxoadipate:succinyl-CoA transferase, B subunit Tax=Micromonospora sp. ATCC 39149 RepID=C4RH15_9ACTO
3-oxoadipate:succinyl-CoA transferase, B subunit {ECO:0000313|EMBL:EEP70364.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
3-oxoadipate:succinyl-CoA transferase subunit B
PLM3_60_coex_sep16_scaffold_2885_11
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9112..9870
DNA (759bp) protein (253aa)
pcaH; Protocatechuate 3,4-dioxygenase, beta chain (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase, beta chain {ECO:0000313|EMBL:CCH33374.1}; EC=1.13.11.3 {ECO:0000313|EMBL:CCH33374.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Protocatechuate 3,4-dioxygenase, beta chain Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K959_SACES
PLM3_60_coex_sep16_scaffold_2885_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9867..10454
DNA (588bp) protein (196aa)
protocatechuate 3,4-dioxygenase alpha chain (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase alpha chain {ECO:0000313|EMBL:AHH95580.1}; EC=1.13.11.3 {ECO:0000313|EMBL:AHH95580.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Protocatechuate 3,4-dioxygenase alpha chain Tax=Saccharopolyspora erythraea RepID=A4FFG2_SACEN
PLM3_60_coex_sep16_scaffold_2885_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10644..11831
DNA (1188bp) protein (396aa)
3-carboxy-cis,cis-muconate cycloisomerase Tax=Saccharopolyspora spinosa RepID=UPI000237AA09
3-carboxy-cis,cis-muconate cycloisomerase
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:AEB45049.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM3_60_coex_sep16_scaffold_2885_14
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11828..12613
DNA (786bp) protein (262aa)
3-oxoadipate enol-lactone hydrolase Tax=Micromonospora sp. ATCC 39149 RepID=C4RH11_9ACTO
3-oxoadipate enol-lactone hydrolase {ECO:0000313|EMBL:EEP70360.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
3-oxoadipate enol-lactonase
PLM3_60_coex_sep16_scaffold_2885_15
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12633..13574
DNA (942bp) protein (314aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B6CECA
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_2885_16
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13581..14714)
DNA (1134bp) protein (378aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036AD6C7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89801.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_2885_17
unknown

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comp(14825..15007)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2885_18
unknown

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comp(15014..15601)
DNA (588bp) protein (196aa)

This feature has no annotations

Displaying 18 items

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