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PLM3_60_coex_sep16_scaffold_2894

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2894_1
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..194)
DNA (192bp) protein (64aa)
Transcriptional regulator, PadR-like family Tax=Frankia sp. CN3 RepID=G6HKX0_9ACTO
Putative transcriptional regulator {ECO:0000313|EMBL:KJE20432.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
PadR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_2894_2
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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424..1137
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PLW5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDA41306.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2894_3
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1561..2625
DNA (1065bp) protein (355aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000366C731
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW96663.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM3_60_coex_sep16_scaffold_2894_4
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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2787..4946
DNA (2160bp) protein (720aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
Polyphosphate kinase Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3A3_9CYAN
polyphosphate kinase 1
PLM3_60_coex_sep16_scaffold_2894_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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5083..6384
DNA (1302bp) protein (434aa)
Transketolase family protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FKS2_DESAA
transketolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_60_coex_sep16_scaffold_2894_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6384..7082
DNA (699bp) protein (233aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transketolase Tax=Salinispora arenicola RepID=UPI00035CB393
transketolase
PLM3_60_coex_sep16_scaffold_2894_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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7079..8203
DNA (1125bp) protein (375aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Transaldolase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZH9_CALAS
tal; transaldolase
PLM3_60_coex_sep16_scaffold_2894_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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8244..10673
DNA (2430bp) protein (810aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7Y0_SPHTD
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_2894_9
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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10670..11767
DNA (1098bp) protein (366aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SG46_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL55132.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glucose-6-phosphate dehydrogenase
PLM3_60_coex_sep16_scaffold_2894_10
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

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11868..12617
DNA (750bp) protein (250aa)
6-phosphogluconolactonase bin=GWC2_TM7_44_17 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
pgl; putative 6-phosphogluconolactonase
Tax=GWC2_TM7_44_17_curated
PLM3_60_coex_sep16_scaffold_2894_11
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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12679..13974
DNA (1296bp) protein (432aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Citrate synthase Tax=Frankia alni (strain ACN14a) RepID=Q0RUE9_FRAAA
PLM3_60_coex_sep16_scaffold_2894_12
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(14181..15209)
DNA (1029bp) protein (343aa)
Histone deacetylase superfamily Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI78_ROSCS
histone deacetylase superfamily protein
Histone deacetylase superfamily {ECO:0000313|EMBL:ABU57178.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3_60_coex_sep16_scaffold_2894_13
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15309..16568
DNA (1260bp) protein (420aa)
Uncharacterized protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TPR7_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54755.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
PLM3_60_coex_sep16_scaffold_2894_14
GWC2_SYX_53_9_curated, Bacteria

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comp(16531..17964)
DNA (1434bp) protein (478aa)
Peptidase M23B bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tax=GWC2_SYX_53_9_curated
PLM3_60_coex_sep16_scaffold_2894_15

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18069..18494
DNA (426bp) protein (142aa)
putative homogentisate 1,2-dioxygenase (EC:1.13.11.5)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EF7A9
Uncharacterized protein {ECO:0000313|EMBL:KKL95157.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 15 items

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