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PLM3_60_coex_sep16_scaffold_1517

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1517_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..526)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D9S9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC80324.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1517_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

631..2859
DNA (2229bp) protein (743aa)
molybdopterin-binding oxidoreductase Tax=Patulibacter americanus RepID=UPI0003B2FACF
molybdopterin oxidoreductase
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ADB50986.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_1517_3
unknown

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2856..3041
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1517_4
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2948..4159)
DNA (1212bp) protein (404aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00037599D5
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJF69535.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3_60_coex_sep16_scaffold_1517_5
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4233..5528
DNA (1296bp) protein (432aa)
Extracellular solute-binding protein family 1 Tax=Frankia sp. (strain EuI1c) RepID=E3JDE4_FRASU
Sugar transporter sugar binding lipoprotein {ECO:0000313|EMBL:CDO22618.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
extracellular solute-binding protein
PLM3_60_coex_sep16_scaffold_1517_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(5541..7430)
DNA (1890bp) protein (630aa)
Diguanylate cyclase/phosphodiesterase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWV6_RUBXD
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABG04122.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1517_7
unknown

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7690..7818
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1517_8
unknown

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7820..7936
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1517_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8082..8705)
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XZ96_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37245.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_60_coex_sep16_scaffold_1517_10
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8850..9761
DNA (912bp) protein (304aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002EBB9A2
Uncharacterized protein {ECO:0000313|EMBL:KIJ80993.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1517_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9819..11576)
DNA (1758bp) protein (586aa)
ABC transporter related protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PSU8_KRIFD
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:ETK31150.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ABC transporter
PLM3_60_coex_sep16_scaffold_1517_12
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11573..13279)
DNA (1707bp) protein (569aa)
ABC transporter transmembrane region Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PSU7_KRIFD
ABC transporter permease
ABC transporter transmembrane region {ECO:0000313|EMBL:ADB34999.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_1517_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13395..13889
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCV4_CONWI
Membrane protein {ECO:0000313|EMBL:KKB13239.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1517_14
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14124..15005)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000368685B
Uncharacterized protein {ECO:0000313|EMBL:KGA11724.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
putative metal ABC transporter permease protein
PLM3_60_coex_sep16_scaffold_1517_15
actinobacterium acAMD-2, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15002..15787)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036CF32B
Uncharacterized protein {ECO:0000313|EMBL:KGA11723.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-2.;"
putative metal ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_1517_16

Not on your lists

comp(15784..16809)
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000375AF33
Uncharacterized protein {ECO:0000313|EMBL:KGA14755.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
putative metal ABC transporter metal-binding protein
PLM3_60_coex_sep16_scaffold_1517_17
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16964..18118)
DNA (1155bp) protein (385aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MX45_9ACTO
MFS transporter {ECO:0000313|EMBL:KGM10268.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
major facilitator superfamily protein
PLM3_60_coex_sep16_scaffold_1517_18
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18208..19464
DNA (1257bp) protein (419aa)
ROK family protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PUG2_STANL
ROK family protein
ROK family protein {ECO:0000313|EMBL:ADD42975.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM3_60_coex_sep16_scaffold_1517_19
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19461..20021)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00037D68AB
Uncharacterized protein {ECO:0000313|EMBL:CCM62734.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
PLM3_60_coex_sep16_scaffold_1517_20
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20281..20700
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YUZ4_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD57997.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM3_60_coex_sep16_scaffold_1517_21
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(20707..21663)
DNA (957bp) protein (319aa)
Putative gluconolactonase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I000_CALAS
putative gluconolactonase
Putative gluconolactonase {ECO:0000313|EMBL:BAL98587.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_60_coex_sep16_scaffold_1517_22
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21721..22665)
DNA (945bp) protein (315aa)
Aldo/keto reductase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVM7_ACIC1
aldo/keto reductase
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EIE99453.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
Displaying 22 items

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