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PLM3_60_coex_sep16_scaffold_1889

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1889_1
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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comp(19..1704)
DNA (1686bp) protein (562aa)
ribonuclease Tax=Nocardiopsis potens RepID=UPI000347CD54
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ADG87803.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_60_coex_sep16_scaffold_1889_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1697..2602)
DNA (906bp) protein (302aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=DAPA_ACIC1
PLM3_60_coex_sep16_scaffold_1889_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2790..3680
DNA (891bp) protein (297aa)
NAD-dependent epimerase/dehydratase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXH3_RUBXD
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABG03905.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_1889_4
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4257..5111)
DNA (855bp) protein (285aa)
Serine/threonine protein kinase Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JJI5_STRRC
Serine/threonine protein kinase {ECO:0000313|EMBL:KJS53749.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
serine/threonine protein kinase
PLM3_60_coex_sep16_scaffold_1889_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5132..7744
DNA (2613bp) protein (871aa)
Potassium transporter Tax=Sorangium cellulosum So0157-2 RepID=S4XIB4_SORCE
potassium transporter
Potassium transporter {ECO:0000313|EMBL:AGP32291.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_60_coex_sep16_scaffold_1889_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7741..9090
DNA (1350bp) protein (450aa)
FHA domain-containing protein Tax=Microcoleus sp. PCC 7113 RepID=K9W9I3_9CYAN
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AFZ16429.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM3_60_coex_sep16_scaffold_1889_7
unknown

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9090..9692
DNA (603bp) protein (201aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1889_8
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9699..10235)
DNA (537bp) protein (179aa)
signal peptide protein Tax=Nesterenkonia sp. F RepID=UPI000255D211
Contig118, whole genome shotgun sequence {ECO:0000313|EMBL:KIU55553.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. UASWS1009.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1889_9
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(10263..11924)
DNA (1662bp) protein (554aa)
serine/threonine protein kinase bin=bin8_Chloro species=Streptomyces sp. R1-NS-10 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative serine/threonine protein kinase
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_1889_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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12026..13231
DNA (1206bp) protein (402aa)
Putative RNA methylase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PLI6_KRIFD
putative RNA methylase
Putative RNA methylase {ECO:0000313|EMBL:ADB30615.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_1889_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(13318..15645)
DNA (2328bp) protein (776aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 11 items

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