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PLM3_60_coex_sep16_scaffold_998

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_998_1
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..313
DNA (312bp) protein (104aa)
Sensor signal transduction histidine kinase Tax=Saccharopolyspora erythraea RepID=A4F779_SACEN
sensor signal transduction histidine kinase
Sensor signal transduction histidine kinase {ECO:0000313|EMBL:CAL99903.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM3_60_coex_sep16_scaffold_998_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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317..739
DNA (423bp) protein (141aa)
Roadblock/LC7 family protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QFA9_CATAD
Roadblock/LC7 family protein
Roadblock/LC7 family protein {ECO:0000313|EMBL:ACU76686.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_60_coex_sep16_scaffold_998_3
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

755..1123
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AUX5_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH11178.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_998_4
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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1104..1718
DNA (615bp) protein (205aa)
Putative uncharacterized protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QFB1_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU76688.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_60_coex_sep16_scaffold_998_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1738..3249)
DNA (1512bp) protein (504aa)
LVIVD repeat-containing protein bin=GWC2_Syntrophus__56_31 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_998_6
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

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3622..4248
DNA (627bp) protein (209aa)
Uncharacterized protein bin=GWC2_TM7_44_17 species=Turicella otitidis genus=Turicella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
PLM3_60_coex_sep16_scaffold_998_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4369..6648)
DNA (2280bp) protein (760aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
phosphoribosylglycinamide synthetase Tax=Frankia sp. BMG5.12 RepID=UPI000370F0EE
PLM3_60_coex_sep16_scaffold_998_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6645..7310)
DNA (666bp) protein (222aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Phosphoribosylformylglycinamidine synthase 1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LCI6_FRASN
PLM3_60_coex_sep16_scaffold_998_9
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7352..8227)
DNA (876bp) protein (292aa)
Penicillin-binding protein, beta-lactamase class C Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BHX5_SANKS
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:KID29798.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
penicillin-binding protein
PLM3_60_coex_sep16_scaffold_998_10
unknown

Not on your lists

comp(8224..9024)
DNA (801bp) protein (267aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_998_11
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9030..9269)
DNA (240bp) protein (80aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
Phosphoribosylformylglycinamidine synthase, purS protein Tax=Streptomyces sp. HPH0547 RepID=S3AX43_9ACTO
phosphoribosylformylglycinamidine synthase subunit PurS
PLM3_60_coex_sep16_scaffold_998_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9334..9570)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000371D268
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
csrA; putative CsrA-like regulator
PLM3_60_coex_sep16_scaffold_998_13
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9802..10641
DNA (840bp) protein (280aa)
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWJ4_ACIC1
RNA polymerase subunit sigma 28
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG {ECO:0000313|EMBL:ABK53804.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_998_14
unknown

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10896..11150
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_998_15
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11176..11853
DNA (678bp) protein (226aa)
Short-chain dehydrogenase/reductase SDR Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TAT5_MICAI
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:EWM67943.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
short-chain dehydrogenase/reductase SDR
PLM3_60_coex_sep16_scaffold_998_16
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11940..14153
DNA (2214bp) protein (738aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
CheA signal transduction histidine kinase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R9I8_PIRSD
CheA signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_998_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14150..14611
DNA (462bp) protein (154aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000371288A
chemotaxis protein CheW
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_998_18
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14653..16116
DNA (1464bp) protein (488aa)
Methyl-accepting chemotaxis sensory transducer Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WGG9_KINRD
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABS05908.1}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Displaying 18 items

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