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PLM3_60_coex_sep16_scaffold_7146

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7146_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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2..619
DNA (618bp) protein (206aa)
Sulfurtransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARX7_RUBXD
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PLM3_60_coex_sep16_scaffold_7146_2
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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642..1994
DNA (1353bp) protein (451aa)
Possible hydrolase Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RV20_RHOSR
hydrolase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
PLM3_60_coex_sep16_scaffold_7146_3
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2021..3259
DNA (1239bp) protein (413aa)
MFS transporter Tax=Amycolatopsis benzoatilytica RepID=UPI000362EA4C
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:CCW12786.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
major facilitator superfamily protein
PLM3_60_coex_sep16_scaffold_7146_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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3501..4121
DNA (621bp) protein (207aa)
ABC-type phosphate/phosphonate transport system periplasmic component-like protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PKJ9_9DELT
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3_60_coex_sep16_scaffold_7146_5
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

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4433..5389
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THM4_9CHLR
Two component signal transduction histidine kinase
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3_60_coex_sep16_scaffold_7146_6
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5574..6221
DNA (648bp) protein (216aa)
Regulatory protein KorSA, GntR-family transcriptional regulator Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2K1U4_STRHJ
regulatory protein KorSA, GntR-family transcriptional regulator
Regulatory protein KorSA, GntR-family transcriptional regulator {ECO:0000313|EMBL:AEY90345.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM3_60_coex_sep16_scaffold_7146_7
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6309..6632
DNA (324bp) protein (108aa)
Putative PadR-like family transcriptional regulator Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9P3_ACTM4
putative PadR-like family transcriptional regulator
Putative PadR-like family transcriptional regulator {ECO:0000313|EMBL:BAL89730.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM3_60_coex_sep16_scaffold_7146_8
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6629..7408
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3J579_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP80677.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_7146_9
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7540..8472
DNA (933bp) protein (311aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI0003636539
NADPH:quinone reductase {ECO:0000313|EMBL:KKD06659.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
NADPH:quinone reductase and related Zn-dependent oxidoreductase
PLM3_60_coex_sep16_scaffold_7146_10
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8651..9211
DNA (561bp) protein (187aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00037FFE0E
Regulatory protein TetR {ECO:0000313|EMBL:EKT82493.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
regulatory protein TetR
PLM3_60_coex_sep16_scaffold_7146_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9393..10439
DNA (1047bp) protein (349aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
spore coat protein Tax=Frankia sp. BMG5.12 RepID=UPI000378199F
dTDP-glucose 4,6-dehydratase
PLM3_60_coex_sep16_scaffold_7146_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(10711..11079)
DNA (369bp) protein (123aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_7146_13
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

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11287..12792
DNA (1506bp) protein (502aa)
hypothetical protein Tax=Gordonia polyisoprenivorans RepID=UPI0002D491A0
amino acid transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_60_coex_sep16_scaffold_7146_14

Not on your lists

comp(12833..14413)
DNA (1581bp) protein (527aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BVE4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN68811.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 14 items

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