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PLM3_60_coex_sep16_scaffold_7647

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7647_1
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..773
DNA (771bp) protein (257aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000369AF60
PpGpp synthetase {ECO:0000313|EMBL:EIF88685.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
PLM3_60_coex_sep16_scaffold_7647_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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785..1231
DNA (447bp) protein (149aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_60_coex_sep16_scaffold_7647_3
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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1306..1605
DNA (300bp) protein (100aa)
PRC-barrel domain protein Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W5C1_KINRD
PRC-barrel domain-containing protein
PRC-barrel domain protein {ECO:0000313|EMBL:ABS02010.1}; species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
PLM3_60_coex_sep16_scaffold_7647_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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1626..2396
DNA (771bp) protein (257aa)
Methyltransferase type 11 Tax=Frankia sp. EUN1f RepID=D3D638_9ACTO
type 11 methyltransferase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3_60_coex_sep16_scaffold_7647_5
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2405..3205)
DNA (801bp) protein (267aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Cyclophilin Tax=Saccharopolyspora erythraea RepID=T2S240_SACER
Cyclophilin {ECO:0000313|EMBL:EQD86463.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM3_60_coex_sep16_scaffold_7647_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3436..4104
DNA (669bp) protein (223aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00035D9F68
Uncharacterized protein {ECO:0000313|EMBL:ETK30459.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
beta-lactamase domain-containing protein
PLM3_60_coex_sep16_scaffold_7647_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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4101..5414
DNA (1314bp) protein (438aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Histidine--tRNA ligase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AEW2_THECD
PLM3_60_coex_sep16_scaffold_7647_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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5411..7129
DNA (1719bp) protein (573aa)
aspartyl-tRNA synthase Tax=Nonomuraea coxensis RepID=UPI00036369D9
aspS; aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACU71284.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_60_coex_sep16_scaffold_7647_9
unknown

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comp(7379..7447)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 9 items

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