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PLM3_60_coex_sep16_scaffold_4560_10

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(6518..7327)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 264.0
  • Bit_score: 237
  • Evalue 2.80e-60
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 265.0
  • Bit_score: 237
  • Evalue 1.40e-59
hypothetical protein Tax=Nocardiopsis halophila RepID=UPI0003462029 similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 262.0
  • Bit_score: 240
  • Evalue 1.50e-60

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Taxonomy

Streptomonospora alba → Streptomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGGGCGCCGTCCCCGGCCGAGCCGGGCCGGCGCCCGAGCGCCGGTTGCGGCTGGTCCTCGCCTATGACGGCGGGCCGTTCTCGGGGTTCGCGCGCCAGCGCGGCCGGCGCACCGTCCAGGGCGAGCTGGAGGCCGCGCTCTCTCGGCTGGCCAAGCGGCCGGTCCGCACGGTGGGCGCCGGTCGCACCGATGCGGGCGTGCACGCCCGTGGCCAGGTCGTGCACGCCGACGTGCCCGACAGGCTCGACCCCGAGCGGGTCCGCTCGGCGCTGAACGGCACCCTCGGCCCGGCCGTGGTGGTGCGCGCGGCGGACTGGGCGCCGGAAGGCTTCGACGCGCGCTTCTCGGCCCGGCGGCGCACCTATGTCTACCGGGTCGACGACTCGGCCGACCCCGACCCCCTGACGCGGGGCTGGGTGCTCCACTGGAGCCGCCCCCTCGAGATCGAACGGATGCGGGTGGCGGCCCGGCCGCTCGTGGGCGAGCACGACTTCGCCGCCTTCTGCCGGGGCCGGCCCGGGGCGACCACCCTGCGCCGGGTCCGGTCGATCACCGTGCGCCGCGTCCGCGGTCTGGTCGAGGTACGCGTGGTGGCAGACGCGTTCTGCTGGCAGATGGTGCGCAGCATCGTCGGGCATCTGCTCGACGTGGGCGACGGCCGCCGGGACCCGGACCGCAGCGCCGCGATCCTGGCCGCCGGGGACCGGTCCGCGCTCGGCAACGTCGCCCCGCCGCACGGCCTGGTGCTCGAGTCGGTCAGCTACGGACCGAGCCCGCCGAAGTTGACCGCTCCGGGGAGGAACCGCTAG
PROTEIN sequence
Length: 270
MGAVPGRAGPAPERRLRLVLAYDGGPFSGFARQRGRRTVQGELEAALSRLAKRPVRTVGAGRTDAGVHARGQVVHADVPDRLDPERVRSALNGTLGPAVVVRAADWAPEGFDARFSARRRTYVYRVDDSADPDPLTRGWVLHWSRPLEIERMRVAARPLVGEHDFAAFCRGRPGATTLRRVRSITVRRVRGLVEVRVVADAFCWQMVRSIVGHLLDVGDGRRDPDRSAAILAAGDRSALGNVAPPHGLVLESVSYGPSPPKLTAPGRNR*