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PLM3_60_coex_sep16_scaffold_4560

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4560_1
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..321)
DNA (321bp) protein (107aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
alanine racemase (EC:5.1.1.1)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI0003605A36
PLM3_60_coex_sep16_scaffold_4560_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(407..1930)
DNA (1524bp) protein (508aa)
YjeF-related protein-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXV8_RUBXD
YjeF-like protein
YjeF-related protein-like protein {ECO:0000313|EMBL:ABG03770.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_4560_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1927..2412)
DNA (486bp) protein (162aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein Tax=Thiomicrospira halophila RepID=UPI000376F6E8
acpS; 4'-phosphopantetheinyl transferase
PLM3_60_coex_sep16_scaffold_4560_4
unknown

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comp(2409..2786)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4560_5
unknown

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comp(2805..3134)
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4560_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3179..4540)
DNA (1362bp) protein (454aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00037D8F5D
hypothetical protein
PLM3_60_coex_sep16_scaffold_4560_7
Botrytis cinerea, Botrytis, Helotiales, Leotiomycetes, Ascomycota, Fungi

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4712..5437
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=Botryotinia fuckeliana RepID=G2Y5H8_BOTF4
Uncharacterized protein {ECO:0000313|EMBL:CCD47918.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis.;" source="Botryotinia fuckeliana (strain T4) (Noble rot fungus) (Botrytis; cinerea).;"
PLM3_60_coex_sep16_scaffold_4560_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(5498..5896)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCL9_NAKMY
30S ribosomal protein S9
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4560_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(5910..6404)
DNA (495bp) protein (165aa)
50S ribosomal protein L13 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRQ5_ACIC1
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
rplM; 50S ribosomal protein L13
PLM3_60_coex_sep16_scaffold_4560_10
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6518..7327)
DNA (810bp) protein (270aa)
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein Tax=Nocardiopsis halophila RepID=UPI0003462029
PLM3_60_coex_sep16_scaffold_4560_11
unknown

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comp(7331..7558)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 11 items

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