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PLM3_60_coex_sep16_scaffold_7960_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(3892..4362)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=Nocardiopsis chromatogenes RepID=UPI0003479E4A similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 154.0
  • Bit_score: 204
  • Evalue 5.30e-50
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 155.0
  • Bit_score: 202
  • Evalue 7.40e-50
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACZ00371.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 155.0
  • Bit_score: 202
  • Evalue 3.70e-49

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGCCAACCCCTGAAGAGCGACTCGAGGAGCTCGGCATCACCCTGCCCGAGCCGGTCGCGCCGCAGGCCGCGTACGTCCCCTGCGTGCGCAGCGGCGACCTCGTGTACGTCTCCGGCCAGGTGCCGCTCGTGGACGGCAAGCCGGGCTGGACAGGCCGGCTGGGCGCGAGCGACCTCTCCGTCGACGACGGGGCCCAGGCAGCGCGGCGCTGCGCGATCAACCTCGTGGCGGCGCTGAAGAAGGAGCTGGGCGACCTCTCGCGGGTGCGCCGGGTGGTCAAGGTGAACGGCTACGTCGCCAGCGACCCGGGCTTCACCGACCAGCCCAAGGTGGTCAACGGGGCCAGCGAGCTGCTCGCCGCGGTGTTCGGCGACGCCGGGCGGCACGCGCGGGCCGCGGTCGGCGTGGCCGCCCTCCCCCTGGGTGTCCCGGTCGAGGTGGAGGCGATCGTGGAGGTCGCCGGCGGGTAG
PROTEIN sequence
Length: 157
MPTPEERLEELGITLPEPVAPQAAYVPCVRSGDLVYVSGQVPLVDGKPGWTGRLGASDLSVDDGAQAARRCAINLVAALKKELGDLSRVRRVVKVNGYVASDPGFTDQPKVVNGASELLAAVFGDAGRHARAAVGVAALPLGVPVEVEAIVEVAGG*