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PLM3_60_coex_sep16_scaffold_7960

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_7960_1
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1083)
DNA (1083bp) protein (361aa)
hydroxyglutarate oxidase (EC:1.1.99.2)
2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:ABW11655.1}; EC=1.1.99.2 {ECO:0000313|EMBL:ABW11655.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
hydroxyglutarate oxidase Tax=Frankia sp. BMG5.12 RepID=UPI00037F5676
PLM3_60_coex_sep16_scaffold_7960_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1209..1502
DNA (294bp) protein (98aa)
ATP-dependent Clp protease adaptor protein ClpS Tax=Celosia cristata RepID=Q0E5Q6_9CARY
clpS; ATP-dependent Clp protease adapter protein ClpS
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_7960_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1502..2008
DNA (507bp) protein (169aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI0003775C46
Transcriptional regulatory protein {ECO:0000313|EMBL:EFL10442.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7960_4
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(2030..2812)
DNA (783bp) protein (261aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Cobalamin synthase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0W4_9ACTN
cobalamin synthase
PLM3_60_coex_sep16_scaffold_7960_5
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2882..3763)
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Brevibacillus panacihumi W25 RepID=V6MDB6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EST56232.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
nuclease
PLM3_60_coex_sep16_scaffold_7960_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3892..4362)
DNA (471bp) protein (157aa)
LysR family transcriptional regulator Tax=Nocardiopsis chromatogenes RepID=UPI0003479E4A
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACZ00371.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_60_coex_sep16_scaffold_7960_7
R_NC10_66_22, NC10, Bacteria

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comp(4402..5478)
DNA (1077bp) protein (359aa)
ATP-dependent helicase Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3T0_9PROT
helicase c2
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_7960_8
unknown

Not on your lists

comp(5671..6540)
DNA (870bp) protein (290aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_7960_9
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6579..6956
DNA (378bp) protein (126aa)
LmbE family protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y5N0_THEBD
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ADG87376.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_60_coex_sep16_scaffold_7960_10
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6968..7120)
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Janibacter sp. HTCC2649 RepID=A3TI55_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAQ00515.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_7960_11
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7248..7517)
DNA (270bp) protein (90aa)
Transcriptional regulator WhiB Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWD0_9ACTN
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
WhiB family transcriptional regulator
PLM3_60_coex_sep16_scaffold_7960_12
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7614..8504)
DNA (891bp) protein (297aa)
SPFH domain / Band 7 family
SPFH domain / Band 7 family {ECO:0000313|EMBL:AHY45545.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
membrane protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
PLM3_60_coex_sep16_scaffold_7960_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(8620..9948)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WLF6_GEOS8
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_60_coex_sep16_scaffold_7960_14
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9996..11015
DNA (1020bp) protein (340aa)
Arsenical pump-driving ATPase (EC:3.6.3.16)
Arsenical pump-driving ATPase {ECO:0000313|EMBL:AGI89097.1}; EC=3.6.3.16 {ECO:0000313|EMBL:AGI89097.1};; Ion-transporting ATPase {ECO:0000313|EMBL:EFE82758.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI0002FEF4B3
PLM3_60_coex_sep16_scaffold_7960_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11112..12047
DNA (936bp) protein (312aa)
ATPase Tax=Actinomadura madurae LIID-AJ290 RepID=U2NFZ4_9ACTO
anion-transporting ATPase
Anion-transporting ATPase {ECO:0000313|EMBL:ACZ83488.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_60_coex_sep16_scaffold_7960_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12363..14807
DNA (2445bp) protein (815aa)
Glycosyl transferase, family 51 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWG6_ACIC1
glycosyl transferase family protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_7960_17
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14867..15316)
DNA (450bp) protein (150aa)
aspartyl-tRNA amidotransferase subunit B Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B76D96
GatB/YqeY domain-containing protein
GatB/YqeY domain protein {ECO:0000313|EMBL:ADG86926.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3_60_coex_sep16_scaffold_7960_18
Renibacterium salmoninarum, Renibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15407..15841
DNA (435bp) protein (145aa)
Phosphoesterase {ECO:0000313|EMBL:ABY24521.1}; EC=3.1.-.- {ECO:0000313|EMBL:ABY24521.1};; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Renibacterium.;" source="Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484; / NBRC 15589 / NCIMB 2235).;"
Phosphoesterase Tax=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) RepID=A9WTK0_RENSM
phosphoesterase
Displaying 18 items

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