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PLM3_60_coex_sep16_scaffold_7960_11

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_7

near complete RP 46 / 55 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 3
Location: comp(7248..7517)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator WhiB Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWD0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 78.0
  • Bit_score: 104
  • Evalue 3.30e-20
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 74.0
  • Bit_score: 108
  • Evalue 3.20e-21
WhiB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 87.0
  • Bit_score: 96
  • Evalue 3.30e-18

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Taxonomy

marine actinobacterium MedAcidi-G3 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCCACCACGTCGTGGGACCTTCAGGTCGGCTGGCAGTACCGTGCCGCCTGTAAAGGACCGCAGTCACACCTGTTCTTCGCACCGAACCGTCTCGAGCGCAAGGACGAACGGGTCACGCGCGAGAGGACGGCGAAAGCCATCTGCCGGCAGTGCCCGGTGCTCGCCGAGTGCCGTGAGTACGCGCTCAGTGTCCGCGAGCCGCACGGGATCTGGGGCGGCCTCAACGAGTACGAGCGGCGGCAGCTCCTGAGCCGCCGTGCGGGCTGA
PROTEIN sequence
Length: 90
MATTSWDLQVGWQYRAACKGPQSHLFFAPNRLERKDERVTRERTAKAICRQCPVLAECREYALSVREPHGIWGGLNEYERRQLLSRRAG*