ggKbase home page

PLM3_60_coex_sep16_scaffold_13679

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_13679_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..395)
DNA (393bp) protein (131aa)
major facilitator transporter Tax=Bradyrhizobium elkanii RepID=UPI00036FE721
Major facilitator transporter {ECO:0000313|EMBL:KJC59418.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
major facilitator transporter
PLM3_60_coex_sep16_scaffold_13679_2
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(427..1290)
DNA (864bp) protein (288aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z7K1_9BRAD
2-dehydro-3-deoxyphosphooctonate aldolase
PLM3_60_coex_sep16_scaffold_13679_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1345..2214)
DNA (870bp) protein (290aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136E0_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40049.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3_60_coex_sep16_scaffold_13679_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2246..2572)
DNA (327bp) protein (109aa)
NIPSNAP family containing protein Tax=Bradyrhizobium elkanii RepID=UPI00035E86CB
NIPSNAP family containing protein {ECO:0000313|EMBL:KJC35823.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_13679_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2784..3158)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI00036A347F
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43545.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ATP-dependent protease Clp ATPase
PLM3_60_coex_sep16_scaffold_13679_6
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3301..4068
DNA (768bp) protein (256aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase Tax=Chamaesiphon minutus PCC 6605 RepID=K9UBQ9_9CHRO
Zn-dependent oxidoreductase, NADPH:quinone reductase
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:AFY92073.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
PLM3_60_coex_sep16_scaffold_13679_7
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4041..4268
DNA (228bp) protein (76aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HTD9_CYAP4
alcohol dehydrogenase
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACL44365.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM3_60_coex_sep16_scaffold_13679_8
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4270..4551)
DNA (282bp) protein (94aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000255|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000255|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000255|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000255|HAMAP-Rule:MF_01227}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
CTP synthase Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6Y4_9BRAD
Displaying 8 items

View Taxonomy