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PLM3_60_coex_sep16_scaffold_15514

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_15514_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1335)
DNA (1335bp) protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002E29528
integral membrane sensor signal transduction histidine kinase
PLM3_60_coex_sep16_scaffold_15514_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1322..2014)
DNA (693bp) protein (231aa)
Two-component response regulator Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D791_BRAJP
transcriptional regulator
Two-component response regulator {ECO:0000313|EMBL:BAL07388.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_coex_sep16_scaffold_15514_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2164..2703)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Bradyrhizobium sp. YR681 RepID=J3I0H1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE08852.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_15514_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2888..3322)
DNA (435bp) protein (145aa)
phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Phosphatidylserine decarboxylase Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUS6_NITWN
PLM3_60_coex_sep16_scaffold_15514_5
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3509..3799
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS62277.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
PLM3_60_coex_sep16_scaffold_15514_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3856..5520
DNA (1665bp) protein (555aa)
class III aminotransferase (EC:5.4.3.8)
glutamate-1-semialdehyde 2,1-aminomutase Tax=Bradyrhizobium elkanii RepID=UPI0002ED75B4
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:KJC52853.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
PLM3_60_coex_sep16_scaffold_15514_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5744..6361)
DNA (618bp) protein (206aa)
Putative uncharacterized protein Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUS8_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03963.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
PLM3_60_coex_sep16_scaffold_15514_8
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6487..7077)
DNA (591bp) protein (197aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Bradyrhizobium sp. YR681 RepID=J3CLH4_9BRAD
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KJC38140.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
pmtA; phosphatidylethanolamine N-methyltransferase
PLM3_60_coex_sep16_scaffold_15514_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7347..8402)
DNA (1056bp) protein (352aa)
Glycosyl transferase, group 1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0G3_9BRAD
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EAQ34276.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
group 1 glycosyl transferase
PLM3_60_coex_sep16_scaffold_15514_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8539..9942
DNA (1404bp) protein (468aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002EDDA55
TRAP transporter {ECO:0000313|EMBL:KJC61103.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_15514_11
unknown

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comp(10001..10234)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_15514_12
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10653..10997
DNA (345bp) protein (115aa)
UPI0003CF11A6 related cluster Tax=unknown RepID=UPI0003CF11A6
Uncharacterized protein {ECO:0000313|EMBL:ESY28774.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
PLM3_60_coex_sep16_scaffold_15514_13
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11016..11906)
DNA (891bp) protein (297aa)
Regulatory protein LuxR Tax=Methylomonas methanica (strain MC09) RepID=G0A511_METMM
Uncharacterized protein {ECO:0000313|EMBL:KJC50303.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_15514_14
unknown

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11932..12234
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 14 items

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