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PLM3_60_coex_sep16_scaffold_4098

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4098_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..607
DNA (606bp) protein (202aa)
membrane protein Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036F0F35
Membrane protein {ECO:0000313|EMBL:ETR78027.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
major facilitator superfamily MFS_1
PLM3_60_coex_sep16_scaffold_4098_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(611..1372)
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q8P1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG56147.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4098_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1435..2073
DNA (639bp) protein (213aa)
cobalt-containing nitrile hydratase subunit alpha Tax=Bradyrhizobium japonicum RepID=UPI0003724ED7
Nitrile hydratase {ECO:0000313|EMBL:KJC35626.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
nthA; nitrile hydratase subunit alpha
PLM3_60_coex_sep16_scaffold_4098_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2070..2729
DNA (660bp) protein (220aa)
Nitrile hydratase, beta subunit Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HN40_9BRAD
Nitrile hydratase {ECO:0000313|EMBL:KJC35625.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
nthB; nitrile hydratase subunit beta
PLM3_60_coex_sep16_scaffold_4098_5
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2729..3106
DNA (378bp) protein (126aa)
Nitrile hydratase accessory protein Tax=Bradyrhizobium sp. YR681 RepID=J3CWJ2_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL10506.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_coex_sep16_scaffold_4098_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3232..4239
DNA (1008bp) protein (336aa)
TRAP dicarboxylate family transporter subunit DctP Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5N6_9BRAD
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJC55121.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
TRAP dicarboxylate family transporter subunit DctP
PLM3_60_coex_sep16_scaffold_4098_7
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4334..4858
DNA (525bp) protein (175aa)
Putative TRAP-type C4-dicarboxylate transport system, small permease component (DctQ subunit) Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YYK2_BRASO
TRAP C4-dicarboxylate transport system subunit DctQ
Putative TRAP-type C4-dicarboxylate transport system, small permease component (DctQ subunit) {ECO:0000313|EMBL:CAL78978.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
PLM3_60_coex_sep16_scaffold_4098_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4885..6177
DNA (1293bp) protein (431aa)
TRAP transporter, DctM subunit Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6M0_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC55095.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
TRAP-type C4-dicarboxylate transport system large permease
PLM3_60_coex_sep16_scaffold_4098_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6362..7078)
DNA (717bp) protein (239aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; 7-cyano-7-deazaguanine synthase; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
7-cyano-7-deazaguanine synthase Tax=Bradyrhizobium elkanii RepID=UPI0002DE421D
ExsB protein
PLM3_60_coex_sep16_scaffold_4098_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7211..8026
DNA (816bp) protein (272aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
MazG family protein Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM88_NITHX
Putative MazG protein {ECO:0000313|EMBL:KGJ70088.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM3_60_coex_sep16_scaffold_4098_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8169..9551)
DNA (1383bp) protein (461aa)
GTPase HflX Tax=Afipia broomeae ATCC 49717 RepID=K8PE91_9BRAD
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hflx; GTP-binding protein HFLX
PLM3_60_coex_sep16_scaffold_4098_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9563..9811)
DNA (249bp) protein (83aa)
RNA-binding protein Hfq Tax=Bradyrhizobiaceae RepID=HFQ_RHOP5
hfq; RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
PLM3_60_coex_sep16_scaffold_4098_13
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10153..10470)
DNA (318bp) protein (106aa)
ATPase AAA Tax=Bradyrhizobium elkanii RepID=UPI000373CF84
two-component response regulator
ATPase AAA {ECO:0000313|EMBL:KJC35615.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Displaying 13 items

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