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PLM3_60_coex_sep16_scaffold_4338

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4338_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..544)
DNA (543bp) protein (181aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
Acetyl-coenzyme A synthetase Tax=Bradyrhizobium diazoefficiens RepID=ACSA_BRADU
acetyl-CoA synthetase
PLM3_60_coex_sep16_scaffold_4338_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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952..2055
DNA (1104bp) protein (368aa)
Topoisomerase IB Tax=Bradyrhizobium sp. YR681 RepID=J3CJ84_9BRAD
DNA topoisomerase {ECO:0000313|EMBL:KJC43939.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4338_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2188..2649)
DNA (462bp) protein (154aa)
Blr0569 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89WV9_BRADU
hypothetical protein
Blr0569 protein {ECO:0000313|EMBL:BAC45834.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM3_60_coex_sep16_scaffold_4338_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2747..3727)
DNA (981bp) protein (327aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
glycerol-3-phosphate dehydrogenase Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036CC080
glycerol-3-phosphate dehydrogenase [NAD
PLM3_60_coex_sep16_scaffold_4338_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3744..4826)
DNA (1083bp) protein (361aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
protein kinase Tax=Bradyrhizobium elkanii RepID=UPI00036B5163
PLM3_60_coex_sep16_scaffold_4338_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5083..5829
DNA (747bp) protein (249aa)
uroporphyrinogen III synthase Tax=Bradyrhizobium japonicum RepID=UPI000381B9AE
Uroporphyrinogen III synthase {ECO:0000313|EMBL:KGT77828.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
uroporphyrinogen III synthase
PLM3_60_coex_sep16_scaffold_4338_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6013..7206
DNA (1194bp) protein (398aa)
Bll0565 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89WW3_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ65001.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4338_8
unknown

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comp(7334..7552)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4338_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7797..8780
DNA (984bp) protein (328aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000371AEC7
Bradyrhizobium elkanii strain UASWS1015 Contig171, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50075.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4338_trna_1
unknown

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8968..9040
DNA (73bp)
transferRNA Thr
PLM3_60_coex_sep16_scaffold_4338_10
unknown

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9157..9411
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4338_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11039..11281
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Nitrobacter sp. Nb-311A RepID=A3X2W0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33428.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_4338_12
Atta cephalotes, Atta, Hymenoptera, Neoptera, Arthropoda, Metazoa

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comp(11349..12917)
DNA (1569bp) protein (523aa)
Metalloendopeptidase {ECO:0000256|RuleBase:RU361183}; EC=3.4.24.- {ECO:0000256|RuleBase:RU361183};; species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Myrmicinae; Atta.;" source="Atta cephalotes (Leafcutter ant).;"
Uncharacterized protein Tax=Atta cephalotes RepID=H9HFW1_ATTCE
nas; flavastacin
PLM3_60_coex_sep16_scaffold_4338_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13747..14796
DNA (1050bp) protein (350aa)
D-cysteine desulfhydrase Tax=Bradyrhizobium sp. STM 3843 PF2_9BRAD">RepID=H0TPF2_9BRAD
dcyD; D-cysteine desulfhydrase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 14 items

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