ggKbase home page

PLM3_60_coex_sep16_scaffold_2797

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2797_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1547)
DNA (1545bp) protein (515aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000375EA0F
Uncharacterized protein {ECO:0000313|EMBL:KJC62729.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2797_2
unknown

Not on your lists

1615..1737
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2797_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2074..3633
DNA (1560bp) protein (520aa)
Putative Omp2b porin Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213J7_RHOPB
putative Omp2b porin
Putative Omp2b porin {ECO:0000313|EMBL:ABD88439.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_2797_4
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3971..4135
DNA (165bp) protein (55aa)
Putative Flp/Fap pilin component Tax=Bradyrhizobium RepID=A4YZP4_BRASO
Flp/Fap pilin component
Putative Flp/Fap pilin component {ECO:0000313|EMBL:CAL79370.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
PLM3_60_coex_sep16_scaffold_2797_5
unknown

Not on your lists

4157..4345
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2797_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4354..4590)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000305BE56
Uncharacterized protein {ECO:0000313|EMBL:KJC49521.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2797_7
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4673..5632)
DNA (960bp) protein (320aa)
Probable DNA repair protein S58_48920 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZBM8_9BRAD
Ku family protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM3_60_coex_sep16_scaffold_2797_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5943..6245)
DNA (303bp) protein (101aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI00036A562B
Uncharacterized protein {ECO:0000313|EMBL:KIZ41591.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2797_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7196..7867
DNA (672bp) protein (224aa)
transcriptional regulator Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036E5C06
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABE62255.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM3_60_coex_sep16_scaffold_2797_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7985..9358
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Two-component sensor histidine kinase Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QK2_BRADU
two-component sensor histidine kinase
PLM3_60_coex_sep16_scaffold_2797_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..10848
DNA (1176bp) protein (392aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00035CB74C
Bradyrhizobium elkanii strain UASWS1015 Contig184, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45335.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2797_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11205..11834
DNA (630bp) protein (210aa)
Cytochrome c-type biogenesis protein CcmI Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HJ00_9BRAD
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KJC56929.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
cycH; cytochrome C-type biogenesis protein
PLM3_60_coex_sep16_scaffold_2797_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11955..12467
DNA (513bp) protein (171aa)
Cytochrome c-type biogenesis protein CcmE Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=CCME_BRADU
cytochrome C biogenesis protein CcdA
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
PLM3_60_coex_sep16_scaffold_2797_14
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12464..12910
DNA (447bp) protein (149aa)
Cytochrome c-type biogenesis protein CycK Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ILQ8_9BRAD
Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:KJC48284.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
cycK; cytochrome c-type biogenesis protein CcmF
Displaying 14 items

View Taxonomy