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PLM3_60_coex_sep16_scaffold_2824

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2824_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..281
DNA (279bp) protein (93aa)
secretion protein HlyD Tax=Afipia birgiae RepID=UPI0002FF94FF
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS42256.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2824_2
unknown

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397..492
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2824_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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542..1960
DNA (1419bp) protein (473aa)
Threonine synthase {ECO:0000313|EMBL:KJC57978.1}; EC=4.2.3.1 {ECO:0000313|EMBL:KJC57978.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89V75_BRADU
PLM3_60_coex_sep16_scaffold_2824_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1957..3246
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHJ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83946.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
mpp; mitochondrial processing peptidase-like protein
PLM3_60_coex_sep16_scaffold_2824_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3380..3967
DNA (588bp) protein (196aa)
GCN5 family N-acetyltransferase Tax=Bradyrhizobium japonicum RepID=UPI00036CFA06
rimJ; ribosomal-protein-alanine N-acetyltransferase
Putative ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:KGJ65640.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM3_60_coex_sep16_scaffold_2824_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4099..4767
DNA (669bp) protein (223aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI000371F6BA
Uncharacterized protein {ECO:0000313|EMBL:CEG09534.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
lipoprotein
PLM3_60_coex_sep16_scaffold_2824_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4994..5479)
DNA (486bp) protein (162aa)
ATP synthase subunit b 1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) PF1_NITHX">RepID=ATPF1_NITHX
H+-transporting two-sector ATPase subunit B/B'
ATP synthase subunit b 1 {ECO:0000255|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b 1 {ECO:0000255|HAMAP-Rule:MF_01398}; ATPase subunit I 1 {ECO:0000255|HAMAP-Rule:MF_01398}; F-type ATPase subunit b 1 {ECO:0000255|HAMAP-Rule:MF_01398}; Short=F-ATPase subunit b 1 {ECO:0000255|HAMAP-Rule:MF_01398};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM3_60_coex_sep16_scaffold_2824_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5485..6042)
DNA (558bp) protein (186aa)
ATP synthase subunit b 2 Tax=Rhodopseudomonas palustris (strain BisB18) PF2_RHOPB">RepID=ATPF2_RHOPB
H+-transporting two-sector ATPase, B/B' subunit
ATP synthase subunit b 2; ATP synthase F(0) sector subunit b 2; ATPase subunit I 2; F-type ATPase subunit b 2; Short=F-ATPase subunit b 2;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_2824_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6108..6335)
DNA (228bp) protein (76aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14)
H+transporting two-sector ATPase C subunit Tax=Bradyrhizobiaceae RepID=B3QF36_RHOPT
ATP synthase F0 subcomplex C subunit {ECO:0000313|EMBL:ABA03505.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
PLM3_60_coex_sep16_scaffold_2824_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6375..7127)
DNA (753bp) protein (251aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a Tax=Rhodopseudomonas palustris (strain BisB5) RepID=ATP6_RHOPS
ATP synthase subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000255|HAMAP-Rule:MF_01393}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3_60_coex_sep16_scaffold_2824_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7216..7413)
DNA (198bp) protein (66aa)
FoF1 ATP synthase, subunit I Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CX0_RHOPS
FoF1 ATP synthase subunit I
FoF1 ATP synthase, subunit I {ECO:0000313|EMBL:ABE38069.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3_60_coex_sep16_scaffold_2824_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8153..8776
DNA (624bp) protein (208aa)
DSBA oxidoreductase Tax=Bradyrhizobium elkanii RepID=UPI0002FC8FEC
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47158.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
DSBA oxidoreductase
PLM3_60_coex_sep16_scaffold_2824_13
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8829..9356
DNA (528bp) protein (176aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002E345E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE04288.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
PLM3_60_coex_sep16_scaffold_2824_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9431..9697
DNA (267bp) protein (89aa)
hypothetical protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037182FF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD90342.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Displaying 14 items

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