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PLM3_60_coex_sep16_scaffold_2930

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2930_1
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..83)
DNA (81bp) protein (27aa)
4-hydroxybenzoyl-CoA thioesterase (EC:3.1.2.23)
Putative 4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:CAL74881.1}; EC=3.1.2.23 {ECO:0000313|EMBL:CAL74881.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Putative 4-hydroxybenzoyl-CoA thioesterase Tax=Bradyrhizobium sp. S23321 RepID=I0G073_9BRAD
PLM3_60_coex_sep16_scaffold_2930_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(92..853)
DNA (762bp) protein (254aa)
Pyrroloquinoline-quinone synthase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRH0_9BRAD
Pyrroloquinoline-quinone synthase {ECO:0000313|EMBL:ERF80182.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
3-hydroxyacyl-CoA dehydrogenase
PLM3_60_coex_sep16_scaffold_2930_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(883..1113)
DNA (231bp) protein (77aa)
Long-chain-fatty-acid--CoA ligase Tax=Bradyrhizobium sp. S23321 RepID=I0G075_9BRAD
Feruloyl-CoA synthase {ECO:0000313|EMBL:KJC57601.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
long-chain-fatty-acid--CoA ligase
PLM3_60_coex_sep16_scaffold_2930_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1139..2731)
DNA (1593bp) protein (531aa)
feruloyl-CoA synthase Tax=Bradyrhizobium elkanii RepID=UPI000362FE28
Feruloyl-CoA synthase {ECO:0000313|EMBL:KJC57601.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
feruloyl-CoA synthase
PLM3_60_coex_sep16_scaffold_2930_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2733..3536)
DNA (804bp) protein (268aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Periplasmic protein TonB Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I9K6_9BRAD
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJC33564.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
PLM3_60_coex_sep16_scaffold_2930_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3797..4258)
DNA (462bp) protein (154aa)
UPF0311 protein C207_06624 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ICT5_9BRAD
UPF0311 protein QU41_20600 {ECO:0000256|HAMAP-Rule:MF_00775}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2930_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4350..5666)
DNA (1317bp) protein (439aa)
Blr7841 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CF6_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR55231.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
PLM3_60_coex_sep16_scaffold_2930_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5673..6182)
DNA (510bp) protein (170aa)
Blr7840 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CF7_BRADU
hypothetical protein
Blr7840 protein {ECO:0000313|EMBL:BAC53105.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM3_60_coex_sep16_scaffold_2930_9
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6265..7281)
DNA (1017bp) protein (339aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component Tax=Bradyrhizobium sp. WSM1253 RepID=I2QMB9_9BRAD
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EIG60925.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
C4-dicarboxylate ABC transporter
PLM3_60_coex_sep16_scaffold_2930_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7422..8591
DNA (1170bp) protein (390aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:KJC33560.1}; EC=1.14.13.2 {ECO:0000313|EMBL:KJC33560.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
4-hydroxybenzoate 3-monooxygenase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I9K2_9BRAD
pobA; 4-hydroxybenzoate 3-monooxygenase
PLM3_60_coex_sep16_scaffold_2930_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8747..9325
DNA (579bp) protein (193aa)
glutathione S-transferase protein (EC:2.5.1.18)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0002F1CE00
Glutathione S-transferase {ECO:0000313|EMBL:ETR77942.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
PLM3_60_coex_sep16_scaffold_2930_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9582..10001
DNA (420bp) protein (140aa)
Bll7837 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CG0_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ64120.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2930_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10187..10585)
DNA (399bp) protein (133aa)
General L-amino acid transport system permease Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H626_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46803.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
LysR family transcriptional regulator
Displaying 13 items

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