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PLM3_60_coex_sep16_scaffold_2994

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2994_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..171
DNA (171bp) protein (57aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q905_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE29886.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
PLM3_60_coex_sep16_scaffold_2994_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(241..1395)
DNA (1155bp) protein (385aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Bradyrhizobium elkanii RepID=UPI0003168C3B
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
PLM3_60_coex_sep16_scaffold_2994_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1392..3749)
DNA (2358bp) protein (786aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|SAAS:SAAS00228809}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|SAAS:SAAS00048832};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VR8_RHOP5
PLM3_60_coex_sep16_scaffold_2994_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4065..5216)
DNA (1152bp) protein (384aa)
recombinase RecF Tax=Bradyrhizobium elkanii RepID=UPI000370E180
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
recombinase RecF
PLM3_60_coex_sep16_scaffold_2994_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5250..5576)
DNA (327bp) protein (109aa)
Putative Excinuclease ABC, C subunit, N-terminal Tax=Bradyrhizobium sp. ORS 285 RepID=H0RSR2_9BRAD
Putative Excinuclease ABC, C subunit, N-terminal {ECO:0000313|EMBL:CCD84989.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
excinuclease ABC subunit C
PLM3_60_coex_sep16_scaffold_2994_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5597..6715)
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta Tax=Afipia broomeae ATCC 49717 RepID=K8NX84_9BRAD
PLM3_60_coex_sep16_scaffold_2994_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7081..8541)
DNA (1461bp) protein (487aa)
Chromosomal replication initiator protein DnaA Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH14_9BRAD
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
dnaA; chromosomal replication initiation protein
PLM3_60_coex_sep16_scaffold_2994_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9783..10049)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RS20_RHOPB
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_2994_9
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10404..10718
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Bradyrhizobium sp. YR681 RepID=J3I247_9BRAD
signal peptide protein
Uncharacterized protein {ECO:0000313|EMBL:EJN12911.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
PLM3_60_coex_sep16_scaffold_2994_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10863..11015
DNA (153bp) protein (51aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
methionine sulfoxide reductase A Tax=Bradyrhizobium elkanii RepID=UPI0003624371
msrA; peptide methionine sulfoxide reductase
Displaying 10 items

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