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PLM3_60_coex_sep16_scaffold_8307

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_8307_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..160
DNA (159bp) protein (53aa)
Purine-binding chemotaxis protein Tax=Bradyrhizobium sp. S23321 RepID=I0GE34_9BRAD
Chemotaxis protein CheW {ECO:0000313|EMBL:KJC39355.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_8307_2
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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207..584
DNA (378bp) protein (126aa)
Chemotaxis protein cheY Tax=Bradyrhizobium RepID=A4YN90_BRASO
cheY; chemotaxis protein CheY
Chemotaxis protein cheY {ECO:0000313|EMBL:CAL75366.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
PLM3_60_coex_sep16_scaffold_8307_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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824..1705
DNA (882bp) protein (294aa)
cheR1; protein-glutamate O-methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
chemotaxis protein CheR Tax=Bradyrhizobium japonicum RepID=UPI000379075E
PLM3_60_coex_sep16_scaffold_8307_4
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1709..2032
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E9G5_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ32809.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PLM3_60_coex_sep16_scaffold_8307_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2270..3754
DNA (1485bp) protein (495aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20Z10_RHOPB
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ABJ08079.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
PLM3_60_coex_sep16_scaffold_8307_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3921..4286)
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC38967.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
PLM3_60_coex_sep16_scaffold_8307_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4423..5058
DNA (636bp) protein (212aa)
Putative two-component transcriptional regulator, LuxR family Tax=Bradyrhizobium sp. STM 3843 RepID=H0U047_9BRAD
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJC38968.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_8307_8
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5104..7656)
DNA (2553bp) protein (851aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
Sensor histidine kinase with HAMP, PAS and Response regulator receiver domains Tax=Bradyrhizobium sp. STM 3843 RepID=H0U048_9BRAD
PLM3_60_coex_sep16_scaffold_8307_9
unknown

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8196..8525
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_8307_10
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8611..9045)
DNA (435bp) protein (145aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=Bradyrhizobium sp. YR681 RepID=J3CTG5_9BRAD
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EJN12364.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
two-component response regulator
PLM3_60_coex_sep16_scaffold_8307_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9313..9564)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PFA7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39439.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
PLM3_60_coex_sep16_scaffold_8307_12
unknown

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comp(9503..9946)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_8307_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10159..12039)
DNA (1881bp) protein (627aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=Bradyrhizobium sp. YR681 RepID=J3CM53_9BRAD
Diguanylate cyclase {ECO:0000313|EMBL:KJC60222.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_8307_14
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12320..13039)
DNA (720bp) protein (240aa)
transcriptional regulator Tax=Bradyrhizobium japonicum RepID=UPI00037917CA
Transcriptional regulator {ECO:0000313|EMBL:EHQ99939.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_8307_15
unknown

Not on your lists

13168..13305
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 15 items

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