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PLM3_60_coex_sep16_scaffold_1029

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1029_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..366)
DNA (366bp) protein (122aa)
Fructose-1,6-bisphosphatase II Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GSN1_9BRAD
steroid monooxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_1029_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(397..2145)
DNA (1749bp) protein (583aa)
Chaperonin GroES Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HP27_9BRAD
Chaperonin GroES {ECO:0000313|EMBL:ERF86563.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
FAD dependent oxidoreductase
PLM3_60_coex_sep16_scaffold_1029_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2924..3478)
DNA (555bp) protein (185aa)
Bll2712 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RQ0_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ68253.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1029_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3514..4332)
DNA (819bp) protein (273aa)
Putative short-chain dehydrogenase Tax=Bradyrhizobium sp. S23321 RepID=I0GCI8_9BRAD
putative short-chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHY52361.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
PLM3_60_coex_sep16_scaffold_1029_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4597..5607
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036A1F0F
Uncharacterized protein {ECO:0000313|EMBL:KJC55035.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1029_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5657..6286)
DNA (630bp) protein (210aa)
DSBA oxidoreductase Tax=Bradyrhizobium elkanii RepID=UPI00036C9652
DSBA oxidoreductase {ECO:0000313|EMBL:KJC40875.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1029_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6890..8800)
DNA (1911bp) protein (637aa)
monooxygenase Tax=Bradyrhizobium elkanii RepID=UPI00036EF2FA
Monooxygenase {ECO:0000313|EMBL:KJC55038.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
monooxygenase
PLM3_60_coex_sep16_scaffold_1029_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8797..9588)
DNA (792bp) protein (264aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036E03C2
Uncharacterized protein {ECO:0000313|EMBL:KJC40773.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
PLM3_60_coex_sep16_scaffold_1029_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9585..10238)
DNA (654bp) protein (218aa)
Transcriptional regulatory protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QE7_BRADU
Transcriptional regulatory protein {ECO:0000313|EMBL:BAR60396.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_1029_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10235..11752)
DNA (1518bp) protein (506aa)
acyl-CoA synthetase Tax=Bradyrhizobium elkanii RepID=UPI00036B42EF
Acyl-CoA synthetase {ECO:0000313|EMBL:KJC40771.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
acyl-CoA synthetase
PLM3_60_coex_sep16_scaffold_1029_11
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11910..13169
DNA (1260bp) protein (420aa)
ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI000379FD92
leucine/isoleucine/valine/threonine/alanine-binding protein
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJN10385.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
PLM3_60_coex_sep16_scaffold_1029_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13268..14170
DNA (903bp) protein (301aa)
ABC transporter permease Tax=Bradyrhizobium elkanii RepID=UPI000371118B
ABC transporter permease {ECO:0000313|EMBL:KJC55043.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_1029_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14167..15201
DNA (1035bp) protein (345aa)
ABC transporter permease Tax=Bradyrhizobium elkanii RepID=UPI000362D631
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43837.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_1029_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15198..15980
DNA (783bp) protein (261aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036AA634
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC55045.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
PLM3_60_coex_sep16_scaffold_1029_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15984..16742
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein Tax=Bradyrhizobium elkanii RepID=UPI00036EB1A4
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC55046.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_1029_16
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16739..17455
DNA (717bp) protein (239aa)
ABC transporter Tax=Bradyrhizobium elkanii RepID=UPI000380F8D4
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43835.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter
PLM3_60_coex_sep16_scaffold_1029_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17697..20096
DNA (2400bp) protein (800aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00035FDB52
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46305.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
L-carnitine dehydratase/bile acid-inducible protein F
PLM3_60_coex_sep16_scaffold_1029_18
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20096..21178
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000371940D
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERF83035.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
oligopeptide binding protein
PLM3_60_coex_sep16_scaffold_1029_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21175..22179
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003768E29
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46303.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
oligopeptide/dipeptide ABC transporter ATPase
PLM3_60_coex_sep16_scaffold_1029_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22210..23778
DNA (1569bp) protein (523aa)
Peptide/nickel transport system permease Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HE02_9BRAD
Peptide/nickel transport system permease {ECO:0000313|EMBL:ERF83033.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
peptide ABC transporter
PLM3_60_coex_sep16_scaffold_1029_21
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23783..24739
DNA (957bp) protein (319aa)
Peptide/nickel transport system permease Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZW3_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46301.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
binding-protein dependent transport system inner membrane protein
PLM3_60_coex_sep16_scaffold_1029_22
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24736..25620
DNA (885bp) protein (295aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036843E6
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46300.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
oligopeptide ABC transporter permease
PLM3_60_coex_sep16_scaffold_1029_23
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25640..28234
DNA (2595bp) protein (865aa)
carbamoyl-phosphate synthase large subunit Tax=Bradyrhizobium elkanii RepID=UPI00036CF67E
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KJC60788.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
pyruvate carboxylase
Displaying 23 items

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