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PLM3_60_coex_sep16_scaffold_1166

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1166_1
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..826)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A0A12
Luciferase family protein {ECO:0000313|EMBL:GAK45994.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
luciferase family protein
PLM3_60_coex_sep16_scaffold_1166_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1036..1836)
DNA (801bp) protein (267aa)
carbon monoxide dehydrogenase (EC:1.2.99.2)
Putative carbon monoxide dehydrogenase medium subunit, coxM-like protein Tax=Bradyrhizobium sp. ORS 285 RepID=H0RXN7_9BRAD
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KJC39005.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
PLM3_60_coex_sep16_scaffold_1166_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1851..4190)
DNA (2340bp) protein (780aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Carbon-monoxide dehydrogenase, large subunit Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HEA6_9BRAD
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ERF82801.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
PLM3_60_coex_sep16_scaffold_1166_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4298..4783)
DNA (486bp) protein (162aa)
carbon-monoxide dehydrogenase small subunit, coxS-like protein (EC:1.2.99.2)
Carbon-monoxide dehydrogenase small subunit Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZ92_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig161, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52087.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
PLM3_60_coex_sep16_scaffold_1166_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5071..5742
DNA (672bp) protein (224aa)
3-oxoadipate CoA-transferase subunit A {ECO:0000313|EMBL:EGP09614.1}; EC=2.8.3.6 {ECO:0000313|EMBL:EGP09614.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
pcaI2; 3-oxoadipate CoA-transferase subunit A (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit A Tax=Afipia birgiae RepID=UPI00031D925C
PLM3_60_coex_sep16_scaffold_1166_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5739..6194
DNA (456bp) protein (152aa)
3-oxoadipate CoA-transferase subunit B {ECO:0000313|EMBL:EGP09613.1}; EC=2.8.3.6 {ECO:0000313|EMBL:EGP09613.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
3-oxoadipate CoA-transferase subunit B Tax=Bradyrhizobiaceae RepID=F7QH07_9BRAD
3-oxoadipate CoA-transferase
PLM3_60_coex_sep16_scaffold_1166_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6191..6337
DNA (147bp) protein (49aa)
3-oxoadipate CoA-transferase subunit B {ECO:0000313|EMBL:EGP09613.1}; EC=2.8.3.6 {ECO:0000313|EMBL:EGP09613.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
3-oxoadipate CoA-transferase subunit B Tax=Bradyrhizobiaceae RepID=F7QH07_9BRAD
PLM3_60_coex_sep16_scaffold_1166_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6601..8592
DNA (1992bp) protein (664aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00037CF25B
Chemotaxis protein {ECO:0000313|EMBL:KJC39014.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
methyl-accepting chemotaxis protein
PLM3_60_coex_sep16_scaffold_1166_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8615..9244)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI000376AB73
Uncharacterized protein {ECO:0000313|EMBL:AHY56010.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1166_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9396..10883
DNA (1488bp) protein (496aa)
Sugar transport protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDK3_BRAJP
MFS transporter
Sugar transport protein {ECO:0000313|EMBL:BAL05590.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_coex_sep16_scaffold_1166_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10890..11801
DNA (912bp) protein (304aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDK2_BRAJP
trehalose phosphatase
PLM3_60_coex_sep16_scaffold_1166_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12013..13473
DNA (1461bp) protein (487aa)
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Trehalose 6-phosphate synthase Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHF4_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig161, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52080.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
PLM3_60_coex_sep16_scaffold_1166_13
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13615..13959)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDK0_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KJC47332.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1166_trna_1
unknown

Not on your lists

14160..14246
DNA (87bp)
transferRNA Ser
PLM3_60_coex_sep16_scaffold_1166_14
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15082..16311
DNA (1230bp) protein (410aa)
NDP-hexose 3-C-methyltransferase TylCIII Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125A7_POLSJ
NDP-hexose 3-C-methyltransferase TylCIII
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3_60_coex_sep16_scaffold_1166_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16332..16985
DNA (654bp) protein (218aa)
Putative uncharacterized protein Tax=Nitrobacter sp. Nb-311A RepID=A3WUG1_9BRAD bin=ACD28 species=Nitrobacter sp. Nb-311A genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_coex_sep16_scaffold_1166_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16994..17401
DNA (408bp) protein (136aa)
dehydratase Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B61AFE
MaoC domain protein dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_coex_sep16_scaffold_1166_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17467..19326
DNA (1860bp) protein (620aa)
FkbH domain protein Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2U6D7_9FIRM
FkbH-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_coex_sep16_scaffold_1166_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19323..20255
DNA (933bp) protein (311aa)
Uncharacterized protein Tax=Synechococcus sp. (strain WH8102) RepID=Q7U920_SYNPX
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_coex_sep16_scaffold_1166_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20255..20494
DNA (240bp) protein (80aa)
Acyl carrier protein Tax=Lachnospiraceae bacterium A2 RepID=R9KA99_9FIRM
Acyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_coex_sep16_scaffold_1166_20
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20487..20969
DNA (483bp) protein (161aa)
arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB (EC:2.6.1.-)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZJ76_ROSLO
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Displaying 21 items

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