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PLM3_60_coex_sep16_scaffold_1377

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1377_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..313
DNA (312bp) protein (104aa)
Putative TolA Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130X2_RHOPS
Membrane protein TolA {ECO:0000313|EMBL:KJC57867.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative TolA
PLM3_60_coex_sep16_scaffold_1377_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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363..1733
DNA (1371bp) protein (457aa)
Protein TolB Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=TOLB_NITWN
tolB; translocation protein TolB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
PLM3_60_coex_sep16_scaffold_1377_3
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1917..4250
DNA (2334bp) protein (778aa)
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YMF5_BRASO
diguanylate cyclase/phosphodiesterase (EAL)
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) {ECO:0000313|EMBL:CAL75081.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
PLM3_60_coex_sep16_scaffold_1377_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4435..5181
DNA (747bp) protein (249aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000370D0AE
Uncharacterized protein {ECO:0000313|EMBL:KJC43750.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1377_5
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5472..5963
DNA (492bp) protein (164aa)
Outer membrane lipoprotein omp16 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z3B7_9BRAD
outer membrane lipoprotein omp16 precursor
Outer membrane lipoprotein omp16 {ECO:0000313|EMBL:BAM87297.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
PLM3_60_coex_sep16_scaffold_1377_6
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6037..6903)
DNA (867bp) protein (289aa)
prolyl aminopeptidase (EC:3.4.11.5)
Putative Prolyl aminopeptidase {ECO:0000313|EMBL:ABQ37462.1}; EC=3.4.11.5 {ECO:0000313|EMBL:ABQ37462.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative Prolyl aminopeptidase Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EMR8_BRASB
PLM3_60_coex_sep16_scaffold_1377_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7155..8108
DNA (954bp) protein (318aa)
Tol-pal system protein YbgF Tax=Bradyrhizobium sp. WSM1253 RepID=I2QGK8_9BRAD
Tol-pal system protein YbgF {ECO:0000313|EMBL:EIG58914.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1377_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8175..9245
DNA (1071bp) protein (357aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036041CB
yaeN; hypothetical protein
PLM3_60_coex_sep16_scaffold_1377_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9503..11425
DNA (1923bp) protein (641aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ATP-dependent zinc metalloprotease FtsH Tax=Bradyrhizobium RepID=G7D8M1_BRAJP
cell division protein FtsH
PLM3_60_coex_sep16_scaffold_1377_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11544..12065
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EKD5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3_60_coex_sep16_scaffold_1377_11
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12225..13430
DNA (1206bp) protein (402aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8M3_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:AHY54262.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
branched-chain amino acid ABC transporter substrate-binding protein
PLM3_60_coex_sep16_scaffold_1377_12
unknown

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13540..13686
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1377_13
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13711..13914
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYV5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE11643.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
Displaying 13 items

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