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PLM3_60_coex_sep16_scaffold_1498

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1498_1
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..813)
DNA (813bp) protein (271aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
Aspartate-semialdehyde dehydrogenase Tax=Bradyrhizobium sp. WSM471 RepID=H5YHE2_9BRAD
aspartate-semialdehyde dehydrogenase
PLM3_60_coex_sep16_scaffold_1498_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1074..2207
DNA (1134bp) protein (378aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Queuine tRNA-ribosyltransferase Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IW39_RHOP2
PLM3_60_coex_sep16_scaffold_1498_3
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2343..2558)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EJR0_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ36404.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PLM3_60_coex_sep16_scaffold_1498_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2779..3756
DNA (978bp) protein (326aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
Cysteine synthase A Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IN91_9BRAD
cysK; cysteine synthase
PLM3_60_coex_sep16_scaffold_1498_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3795..4034
DNA (240bp) protein (80aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214P1_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88145.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_1498_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4049..4390
DNA (342bp) protein (114aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI0003810708
Uncharacterized protein {ECO:0000313|EMBL:EKS39789.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1498_7
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4468..5901)
DNA (1434bp) protein (478aa)
Blr4680 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89L68_BRADU
Peptidase {ECO:0000313|EMBL:KJC35741.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1498_8
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6103..6942)
DNA (840bp) protein (280aa)
Blr4679 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89L69_BRADU
hypothetical protein
Multidrug DMT transporter permease {ECO:0000313|EMBL:KJC37245.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
PLM3_60_coex_sep16_scaffold_1498_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7245..7643
DNA (399bp) protein (133aa)
endoribonuclease L-PSP Tax=Bradyrhizobium elkanii RepID=UPI00031BFC3E
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJC59556.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1498_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7655..7876
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IW44_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD07566.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_60_coex_sep16_scaffold_1498_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7873..8481)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0003773144
hypothetical protein
Blr4677 protein {ECO:0000313|EMBL:BAC49942.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
PLM3_60_coex_sep16_scaffold_1498_12
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8943..9533)
DNA (591bp) protein (197aa)
Putative Methionyl-tRNA formyltransferase Tax=Bradyrhizobium sp. S23321 RepID=I0G7E5_9BRAD
putative Methionyl-tRNA formyltransferase
Putative Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:BAL76682.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
PLM3_60_coex_sep16_scaffold_1498_13
unknown

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9943..10155
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1498_14
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10171..10410)
DNA (240bp) protein (80aa)
Type IV pilus assembly PilZ Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218S5_RHOPB
Pilus assembly protein PilZ {ECO:0000313|EMBL:KJC59326.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
type IV pilus assembly PilZ
PLM3_60_coex_sep16_scaffold_1498_15
unknown

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comp(12151..12447)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1498_16
unknown

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comp(13056..13217)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1498_17
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13296..13520)
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Bradyrhizobium sp. YR681 RepID=J3CVL8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN13604.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1498_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13738..14040)
DNA (303bp) protein (101aa)
Glutathione S-transferase Tax=Cystobacter fuscus DSM 2262 RepID=S9QNU7_9DELT
Glutathione S-transferase domain protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 18 items

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