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PLM3_60_coex_sep16_scaffold_11722_2

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(669..1280)

Top 3 Functional Annotations

Value Algorithm Source
SSU ribosomal protein S30P / sigma 54 modulation protein Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21C97_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 201.0
  • Bit_score: 328
  • Evalue 2.40e-87
Uncharacterized protein {ECO:0000313|EMBL:KIZ47761.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 203.0
  • Bit_score: 331
  • Evalue 6.80e-88
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 201.0
  • Bit_score: 328
  • Evalue 6.90e-88

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACTCTCCGAATCTCGGGAAAAAGCATCAGTGTCGGCGACGCGCTGCGCGGGCGCGTCACCGAGCGCACCGATGAAGTCCTGCGCAAATACTTCGATGGCAATTATTCCGGCCACATCACGCTGAGCAAGGATGGTTTCGGCTTCCGCACCGACTGCGCGCTGCATCTGGATTCCGGAATTACGCTCGAGGCCGATTCCAATGCCGTCGACGCCTATACCAGCGCCGATCAGGCACTGGCTCAGATTGAGAAGCGGCTGCGCCGCTACAAGAGCCGCCTGAAGGATCGTTCGGCGCGAAAGTCGCATGCTGAAGCGGTTGCGATGGTTGAATTGACTTCGCCAACCCTCAATGCCCCGAGCTACGTGATCGAGGCGCCGGCGGGAGACGTCGAGCACGACGAGACCGGCTACAGTCCGGTGATCATCGCCGAGGCGACAACTTCGCTGAAGCGGATGTCGGTGAGCGAAGCGGTGATGGAGCTGGACCTGACCGGCGCCGCCTGCATCGTGTTCCAGCACGGCAGCAACGGGCGGGTGAACATCATTTACAGGAGGCCGGACGGCAATGTCGGCTGGATCGATCCCCCGGTGGTTAACTCCGGGGGGTAG
PROTEIN sequence
Length: 204
MTLRISGKSISVGDALRGRVTERTDEVLRKYFDGNYSGHITLSKDGFGFRTDCALHLDSGITLEADSNAVDAYTSADQALAQIEKRLRRYKSRLKDRSARKSHAEAVAMVELTSPTLNAPSYVIEAPAGDVEHDETGYSPVIIAEATTSLKRMSVSEAVMELDLTGAACIVFQHGSNGRVNIIYRRPDGNVGWIDPPVVNSGG*