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PLM3_60_coex_sep16_scaffold_12680

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_12680_1
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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65..517
DNA (453bp) protein (151aa)
Polyketide cyclase/dehydrase Tax=Methanobacterium formicicum DSM 3637 RepID=K2R4L4_METFO
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:EKF86167.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
polyketide cyclase/dehydrase
PLM3_60_coex_sep16_scaffold_12680_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(538..1197)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JWF1_STRRC
Pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:ETK33138.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
pterin-4-alpha-carbinolamine dehydratase
PLM3_60_coex_sep16_scaffold_12680_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1267..1815)
DNA (549bp) protein (183aa)
mini-circle protein Tax=Frankia sp. Iso899 RepID=UPI0003B4BB4D
Uncharacterized protein {ECO:0000313|EMBL:CCH20471.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_12680_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1920..3269)
DNA (1350bp) protein (450aa)
Adenylyl cyclase Tax=Modestobacter marinus (strain BC501) RepID=I4EV18_MODMB
adenylyl cyclase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_coex_sep16_scaffold_12680_5
unknown

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3354..3629
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_12680_6
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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4009..4848
DNA (840bp) protein (280aa)
Probable DNA repair protein BLASA_1744 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNB5_BLASD
putative DNA end-binding protein Ku
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_12680_7
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4871..5833)
DNA (963bp) protein (321aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Mycobacterium smegmatis JS623 RepID=L0J122_MYCSM
drug resistance transporter, EmrB/QacA subfamily
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AGB25009.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM3_60_coex_sep16_scaffold_12680_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(6544..7101)
DNA (558bp) protein (186aa)
Transcriptional regulator, TetR family Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRK4_ACIC1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABK52064.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_12680_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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7246..7770
DNA (525bp) protein (175aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000382270A
sig48; putative sigma factor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_12680_10
unknown

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7767..8036
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 10 items

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