ggKbase home page

PLM3_60_coex_sep16_scaffold_6863

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6863_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..758)
DNA (756bp) protein (252aa)
cell division protein FtsZ Tax=Demetria terragena RepID=UPI000380A036
cell division protein FtsZ
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6863_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(994..1719)
DNA (726bp) protein (242aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00035EB10F
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6863_3
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1736..2689)
DNA (954bp) protein (318aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=Paenibacillus ginsengihumi RepID=UPI0003603CCB
PLM3_60_coex_sep16_scaffold_6863_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2686..4134)
DNA (1449bp) protein (483aa)
murC; UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RTR7_BLASD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6863_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(4131..5234)
DNA (1104bp) protein (368aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Tax=Desulfotomaculum RepID=F6B3E6_DESCC bin=16ft_combo_ws3_JS1 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6863_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5231..7828)
DNA (2598bp) protein (866aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Tax=Saccharopolyspora spinosa RepID=UPI0002378E89
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6863_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7825..8874)
DNA (1050bp) protein (350aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Frankia sp. (strain CcI3) RepID=MRAY_FRASC
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6863_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8871..9932)
DNA (1062bp) protein (354aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00036CBBE4
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 8 items

View Taxonomy