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PLM3_60_coex_sep16_scaffold_6933

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6933_1
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(1..1002)
DNA (1002bp) protein (334aa)
Glutamate dehydrogenase Tax=Caldithrix abyssi DSM 13497 RepID=H1XY35_9BACT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
NADP-dependent glutamate dehydrogenase
PLM3_60_coex_sep16_scaffold_6933_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1162..1431
DNA (270bp) protein (90aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6933_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1447..1695)
DNA (249bp) protein (83aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6933_4
unknown

Not on your lists

1935..2396
DNA (462bp) protein (154aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6933_5
unknown

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2958..4070
DNA (1113bp) protein (371aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6933_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4067..5794
DNA (1728bp) protein (576aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2V4_9FIRM
AMP-dependent synthetase and ligase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6933_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5791..6336
DNA (546bp) protein (182aa)
GCN5 family acetyltransferase Tax=Paenibacillus mucilaginosus K02 RepID=I0BBH6_9BACL
GCN5 family acetyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6933_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6318..7025
DNA (708bp) protein (236aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q9C2_CATAD
HAD-superfamily hydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6933_9
unknown

Not on your lists

comp(7035..7550)
DNA (516bp) protein (172aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6933_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7604..8389)
DNA (786bp) protein (262aa)
Dihydrodipicolinate synthetase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8E6_CALAS
dapA; dihydrodipicolinate synthetase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6933_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8785..10152)
DNA (1368bp) protein (456aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2R7_9FIRM
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_6933_12
unknown

Not on your lists

comp(10368..10526)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6933_13

Not on your lists

10554..10838
DNA (285bp) protein (95aa)
Transcriptional regulator, AbrB family Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BY83_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:KKL21747.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AbrB family transcriptional regulator
PLM3_60_coex_sep16_scaffold_6933_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10835..11245
DNA (411bp) protein (137aa)
Ribonuclease VapC Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BY84_BEUC1
twitching mobility protein PilT
Tax=RBG_16_Nitrospirae_64_22_curated
PLM3_60_coex_sep16_scaffold_6933_15
unknown

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comp(11273..11692)
DNA (420bp) protein (140aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6933_16
unknown

Not on your lists

comp(11679..12125)
DNA (447bp) protein (149aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6933_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12296..13564
DNA (1269bp) protein (423aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W254_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ43209.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_60_coex_sep16_scaffold_6933_18
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13675..14727
DNA (1053bp) protein (351aa)
ATP-dependent DNA ligase Tax=Actinopolymorpha alba RepID=UPI000369FD34
ATP-dependent DNA ligase LigC {ECO:0000313|EMBL:GAB13138.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
ligC; ATP-dependent DNA ligase
PLM3_60_coex_sep16_scaffold_6933_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14732..16345)
DNA (1614bp) protein (538aa)
putative thymidylate synthase (EC:2.1.1.-)
Thymidylate synthase complementing protein ThyX bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_6933_20
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

comp(16348..17952)
DNA (1605bp) protein (535aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003761155
PASTA sensor-containing serine/threonine protein kinase
Tax=BJP_IG2158_Actinobacteria_57_21
PLM3_60_coex_sep16_scaffold_6933_21
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18056..19540)
DNA (1485bp) protein (495aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Cell elongation-specific peptidoglycan D,D-transpeptidase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LQT6_ACIC1
Cell division protein FtsI {ECO:0000313|EMBL:EYR65056.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
PLM3_60_coex_sep16_scaffold_6933_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(19541..20113)
DNA (573bp) protein (191aa)
Cell cycle protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIS9_NAKMY
cell cycle protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 22 items

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