ggKbase home page

PLM3_60_coex_sep16_scaffold_11716

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_11716_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)
3-oxoadipate:succinyl-CoA transferase, A subunit bin=GWC2_Chloroflexi_73_18 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
3-oxoadipate:succinyl-CoA transferase subunit A
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_11716_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(144..539)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00034D5E3D
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_11716_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(544..1836)
DNA (1293bp) protein (431aa)
acetylornithine transaminase (EC:2.6.1.11)
Acetylornithine aminotransferase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W7X1_ACTMD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_11716_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1833..2303)
DNA (471bp) protein (157aa)
Aldehyde dehydrogenase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W7X2_ACTMD
aldehyde dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_11716_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2249..3409)
DNA (1161bp) protein (387aa)
Aldehyde dehydrogenase Tax=uncultured prokaryote RepID=H5SL59_9ZZZZ
aldehyde dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_11716_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3613..4326
DNA (714bp) protein (238aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_11716_7
unknown

Not on your lists

comp(4340..4921)
DNA (582bp) protein (194aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_11716_8
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4918..6030)
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Oscillatoria formosa RepID=UPI00037EA923
Putative low-complexity protein {ECO:0000313|EMBL:EHQ92177.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
putative low-complexity protein
PLM3_60_coex_sep16_scaffold_11716_9
unknown

Not on your lists

6033..6695
DNA (663bp) protein (221aa)

This feature has no annotations

Displaying 9 items

View Taxonomy