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PLM3_60_coex_sep16_scaffold_5052

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5052_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31..1359)
DNA (1329bp) protein (443aa)
Cyclic 2,3-diphosphoglycerate synthetase {ECO:0000255|HAMAP-Rule:MF_01908}; Short=cDPGS {ECO:0000255|HAMAP-Rule:MF_01908};; EC=6.5.-.- {ECO:0000255|HAMAP-Rule:MF_01908};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Cyclic 2,3-diphosphoglycerate synthetase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=CPGS_RUBXD
cyclic 2,3-diphosphoglycerate-synthetase
PLM3_60_coex_sep16_scaffold_5052_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(1394..2269)
DNA (876bp) protein (292aa)
Metallophosphoesterase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF9_RUBXD
putative phosphohydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2306..3475
DNA (1170bp) protein (390aa)
Colicin V production protein Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2A4_ACIFD
Colicin V production protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3778..4362
DNA (585bp) protein (195aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F246_CONWI
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADB50221.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_5052_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4374..6617)
DNA (2244bp) protein (748aa)
Putative Amylo-alpha-1,6-glucosidase, contains cNTP-binding domain {ECO:0000313|EMBL:CCF84768.1}; EC=3.2.1.33 {ECO:0000313|EMBL:CCF84768.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Putative Amylo-alpha-1,6-glucosidase, contains cNTP-binding domain Tax=Nitrolancetus hollandicus Lb RepID=I4EJA6_9CHLR
glycogen debranching protein
PLM3_60_coex_sep16_scaffold_5052_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(6651..7064)
DNA (414bp) protein (138aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase Tax=Paenibacillus RepID=F5LNC4_9BACL
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_coex_sep16_scaffold_5052_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7276..8133)
DNA (858bp) protein (286aa)
Threonine synthase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AE41_THECD
threonine synthase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8258..8920)
DNA (663bp) protein (221aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARV0_STRRD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_9
unknown

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9028..9699
DNA (672bp) protein (224aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5052_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9552..11225)
DNA (1674bp) protein (558aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI0003649F58
arginyl-tRNA synthetase
Tax=CG_Solirubrobact_01
PLM3_60_coex_sep16_scaffold_5052_trna_1
unknown

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11326..11397
DNA (72bp)
transferRNA Arg
PLM3_60_coex_sep16_scaffold_5052_11
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11456..11866
DNA (411bp) protein (137aa)
Phosphoglycerate mutase family protein Tax=Sphingomonas sp. S17 RepID=F3WY94_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKC02090.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
Putative phosphohistidine phosphatase
PLM3_60_coex_sep16_scaffold_5052_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11863..12489
DNA (627bp) protein (209aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI00037655D8
pyridoxamine 5'-phosphate oxidase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12521..14035
DNA (1515bp) protein (505aa)
Peptidase M20 Tax=Patulibacter medicamentivorans RepID=H0E3Z0_9ACTN
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_14
unknown

Not on your lists

comp(14325..14450)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_5052_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14447..15037)
DNA (591bp) protein (197aa)
ABC transporter permease protein bin=GWC2_Chloroflexi_73_18 species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter permease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15040..15939)
DNA (900bp) protein (300aa)
spermidine/putrescine ABC transporter permease bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
spermidine/putrescine ABC transporter permease
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_5052_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(16024..18021)
DNA (1998bp) protein (666aa)
Spermidine/putrescine-binding periplasmic protein bin=GWC2_Chloroflexi_73_18 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
spermidine/putrescine ABC transporter substrate-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_18
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18006..18332)
DNA (327bp) protein (109aa)
spermidine/putrescine ABC transporter ATPase bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
spermidine/putrescine ABC transporter ATPase
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_5052_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18428..19399)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI000375971A
dihydroorotate dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19422..19928
DNA (507bp) protein (169aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATP7_RUBXD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(19945..20703)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B6366D
prmA; ribosomal protein L11 methyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

21097..22374
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Candidatus Microthrix RepID=R4Z0H3_9ACTN
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_23
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22465..24513
DNA (2049bp) protein (683aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034D8FED
Transketolase {ECO:0000313|EMBL:KIF35199.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
transketolase
PLM3_60_coex_sep16_scaffold_5052_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

24522..25346
DNA (825bp) protein (275aa)
hypothetical protein bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5052_25
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25343..26029)
DNA (687bp) protein (229aa)
6-phosphogluconolactonase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7W7_ANADF
Uncharacterized protein {ECO:0000313|EMBL:ETK32749.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
6-phosphogluconolactonase
PLM3_60_coex_sep16_scaffold_5052_26
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26026..26463)
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PL14_KRIFD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB34269.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_5052_27
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

26536..27033
DNA (498bp) protein (166aa)
hypothetical protein Tax=Nocardiopsis halophila RepID=UPI00034D7BE1
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KJE77992.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
acetyltransferase
PLM3_60_coex_sep16_scaffold_5052_28
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(27030..28997)
DNA (1968bp) protein (656aa)
ABC transporter related protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAH6_SPHTD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ40819.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3_60_coex_sep16_scaffold_5052_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29076..29606
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8NW12_9BRAD
MgtC family protein
Uncharacterized protein {ECO:0000313|EMBL:EKS34527.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Displaying items 1-30 of 32 in total

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