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PLM3_60_coex_sep16_scaffold_5492

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_5492_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2..265)
DNA (264bp) protein (88aa)
CoA-binding domain protein bin=GWB2_Deltaproteobacteria_65_81 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
CoA-binding domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(262..1095)
DNA (834bp) protein (278aa)
enoyl-CoA hydratase Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034891B3
enoyl-CoA hydratase/isomerase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_3
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1163..2368)
DNA (1206bp) protein (402aa)
twin-arginine translocation pathway signal protein Tax=Leucobacter sp. UCD-THU RepID=UPI00036735E3
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:EYT55276.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
amine oxidase
PLM3_60_coex_sep16_scaffold_5492_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2473..3786
DNA (1314bp) protein (438aa)
Extracellular solute-binding protein family 1 Tax=Mycobacterium tusciae JS617 RepID=H1JXK2_9MYCO
ABC transporter substrate-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3773..4744
DNA (972bp) protein (324aa)
Polyamine ABC transporter permease Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QQ80_MYCS2
polyamine ABC transporter permease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5117..5641
DNA (525bp) protein (175aa)
Binding-protein-dependent transport systems inner membrane component Tax=Mycobacterium rhodesiae JS60 RepID=G4HXW5_MYCRH
polyamine ABC transporter permease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5646..6743)
DNA (1098bp) protein (366aa)
Spermidine/putrescine ABC transporter ATPase subunit Tax=Mycobacterium tusciae JS617 RepID=H1JXK0_9MYCO
spermidine/putrescine ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_8
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(6891..7364)
DNA (474bp) protein (158aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein bin=bin8_Chloro species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_5492_9
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(7361..8275)
DNA (915bp) protein (305aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] bin=bin8_Chloro species=Cupriavidus taiwanensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
molybdopterin dehydrogenase FAD-binding protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_5492_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(8316..10211)
DNA (1896bp) protein (632aa)
xanthine dehydrogenase (EC:1.17.1.4)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein bin=bin8_Chloro species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_5492_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10514..10798)
DNA (285bp) protein (95aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000364B966
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_12

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11151..11759
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM03174.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_5492_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11769..12041
DNA (273bp) protein (91aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12108..12761
DNA (654bp) protein (218aa)
putative DNA alkylation repair enzyme bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_5492_15
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(12770..13705)
DNA (936bp) protein (312aa)
hypothetical protein bin=bin8_Chloro species=Streptomyces albulus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_5492_16
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13776..16037)
DNA (2262bp) protein (754aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037C9795
Integral membrane protein {ECO:0000313|EMBL:AKG53381.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
MMPL domain-containing protein
PLM3_60_coex_sep16_scaffold_5492_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16205..16885
DNA (681bp) protein (227aa)
Probable transcriptional regulator, TetR family protein Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SCI1_RHOSR
TetR family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 17 items

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