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PLM3_60_coex_sep16_scaffold_4671

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4671_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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3..170
DNA (168bp) protein (56aa)
Protein translocase subunit SecY Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3XAE8_9ACTO
preprotein translocase subunit Ssecy
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

193..855
DNA (663bp) protein (221aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q151_9FIRM
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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852..1628
DNA (777bp) protein (259aa)
Methionine aminopeptidase Tax=Desmospora sp. 8437 RepID=F5SID7_9BACL
methionine aminopeptidase type I
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1768..2511
DNA (744bp) protein (248aa)
cellulose-binding protein Tax=Nocardiopsis gilva RepID=UPI000349D3E2
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2654..2872
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKJ1_9BACT
infA; translation initiation factor IF-1
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_6
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2886..2999
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GJ61_PROFC
hypothetical protein
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
PLM3_60_coex_sep16_scaffold_4671_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


3009..3389
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=Nocardiopsis xinjiangensis RepID=UPI000370DF86
rpsM; 30S ribosomal protein S13
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_8
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3400..3792
DNA (393bp) protein (131aa)
30S ribosomal protein S11 Tax=Streptomyces scabrisporus RepID=UPI00037B14C4
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 100.;"
PLM3_60_coex_sep16_scaffold_4671_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3876..4805
DNA (930bp) protein (310aa)
DNA-directed RNA polymerase subunit alpha Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y545_THEBD
DNA-directed RNA polymerase subunit alpha
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


4809..5168
DNA (360bp) protein (120aa)
50S ribosomal protein L17 Tax=Frankia sp. Iso899 RepID=UPI0003B3C094
50S ribosomal protein L17
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_4671_11
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

5207..5977
DNA (771bp) protein (257aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI0003827277
Tax=BJP_IG2102_Coriobacteriales_64_17
PLM3_60_coex_sep16_scaffold_4671_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

5977..6852
DNA (876bp) protein (292aa)
molybdopterin dehydrogenase FAD-binding protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
carbon-monoxide dehydrogenase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3_60_coex_sep16_scaffold_4671_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

6852..7460
DNA (609bp) protein (203aa)
(2Fe-2S)-binding protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Nocardia brasiliensis genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
(2Fe-2S)-binding domain-containing protein
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Displaying 13 items

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