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PLM3_60_coex_sep16_scaffold_2058

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2058_1
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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44..955
DNA (912bp) protein (304aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000365D1B7
Uncharacterized protein {ECO:0000313|EMBL:KIJ80993.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2058_2
unknown

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comp(1186..1620)
DNA (435bp) protein (145aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2058_3
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

1801..3285
DNA (1485bp) protein (495aa)
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactosephosphotransferase Tax=Frankia sp. (strain CcI3) RepID=Q2J688_FRASC
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM3_60_coex_sep16_scaffold_2058_4
unknown

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comp(3242..3709)
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2058_5
unknown

Not on your lists

3973..4527
DNA (555bp) protein (185aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2058_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4620..5897
DNA (1278bp) protein (426aa)
Polysaccharide biosynthesis protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYJ3_RUBXD
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ABG03535.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_2058_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5907..6443)
DNA (537bp) protein (179aa)
GDP-mannose:glycolipid 4-beta-D-mannosyltransferase {ECO:0000313|EMBL:KJL29522.1}; EC=2.4.1.251 {ECO:0000313|EMBL:KJL29522.1};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Glycosyl transferase group 1 Tax=Microbacterium RepID=H8E928_9MICO
group 1 glycosyl transferase
PLM3_60_coex_sep16_scaffold_2058_8

Not on your lists

comp(7047..9299)
DNA (2253bp) protein (751aa)
thymidylate kinase-like bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Thymidylate kinase-like protein {ECO:0000313|EMBL:EKD46962.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thymidylate kinase
PLM3_60_coex_sep16_scaffold_2058_9
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9405..10472
DNA (1068bp) protein (356aa)
Polysaccharide deacetylase {ECO:0000313|EMBL:EMI21120.1}; EC=3.-.-.- {ECO:0000313|EMBL:EMI21120.1};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
Polysaccharide deacetylase Tax=Rhodopirellula maiorica SM1 RepID=M5RP98_9PLAN
polysaccharide deacetylase
PLM3_60_coex_sep16_scaffold_2058_10
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10465..11214
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L8R4_SIMNZ
hypothetical protein
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
PLM3_60_coex_sep16_scaffold_2058_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11218..12120)
DNA (903bp) protein (301aa)
putative glycosyltransferase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
glycosyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_60_coex_sep16_scaffold_2058_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12335..13105
DNA (771bp) protein (257aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036A271E
WecB/TagA/CpsF family glycosyl transferase
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ADP78281.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM3_60_coex_sep16_scaffold_2058_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13093..14241
DNA (1149bp) protein (383aa)
Glycosyl transferase group 1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKN7_RHOMR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEN73885.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM3_60_coex_sep16_scaffold_2058_14
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14211..15167)
DNA (957bp) protein (319aa)
fcl; GDP-L-fucose synthetase (EC:1.1.1.271)
GDP-L-fucose synthase Tax=Thermus aquaticus Y51MC23 RepID=B7AAI5_THEAQ
Tax=GWF2_Alphaproteobacteria_58_20_curated
PLM3_60_coex_sep16_scaffold_2058_15
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15160..16194)
DNA (1035bp) protein (345aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
GDP-mannose 4,6-dehydratase
Tax=RBG_13_Deltaproteobacteria_58_19_curated
PLM3_60_coex_sep16_scaffold_2058_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16360..18072
DNA (1713bp) protein (571aa)
Lipopolysaccharide biosynthesis protein Tax=Actinoplanes sp. N902-109 RepID=R4L7R8_9ACTO
lipopolysaccharide biosynthesis protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2058_trna_1
unknown

Not on your lists

comp(18310..18384)
DNA (75bp)
transferRNA Arg
PLM3_60_coex_sep16_scaffold_2058_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

18547..18840
DNA (294bp) protein (98aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003702552
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2058_18
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18855..19193)
DNA (339bp) protein (113aa)
hypothetical protein Tax=Streptomyces RepID=UPI00036597F4
Uncharacterized protein {ECO:0000313|EMBL:EMP12896.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. NB4-1Y.;"
PLM3_60_coex_sep16_scaffold_2058_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(19617..20024)
DNA (408bp) protein (136aa)
CRP/FNR family transcriptional regulator bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cyclic nucleotide-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_2058_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20104..21663
DNA (1560bp) protein (520aa)
delta-1-piperideine-6-carboxylate dehydrogenase (EC:1.2.1.-)
Delta-1-piperideine-6-carboxylate dehydrogenase {ECO:0000313|EMBL:ABG05835.1}; EC=1.2.1.- {ECO:0000313|EMBL:ABG05835.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Delta-1-piperideine-6-carboxylate dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ3_RUBXD
PLM3_60_coex_sep16_scaffold_2058_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

21663..22787
DNA (1125bp) protein (375aa)
Metallo-dependent hydrolase (EC:3.1.8.1)
Parathion hydrolase Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3F3_CAUCN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 22 items

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