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PLM3_60_coex_sep16_scaffold_1982

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1982_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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3..830
DNA (828bp) protein (276aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00037EF646
alpha/beta fold family hydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1982_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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842..1324
DNA (483bp) protein (161aa)
YbaK/prolyl-tRNA synthetase associated region Tax=Isoptericola variabilis (strain 225) RepID=F6FQW4_ISOV2
YbaK/prolyl-tRNA synthetase associated domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_1982_3
unknown

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1426..1827
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1982_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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1908..2588
DNA (681bp) protein (227aa)
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=uncultured candidate division OP1 bacterium RepID=H5SQV1_9BACT bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
OmpR family two-component response regulator
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_1982_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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2683..3702
DNA (1020bp) protein (340aa)
histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_1982_6
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3713..4885)
DNA (1173bp) protein (391aa)
glycine cleavage system protein T Tax=Nocardiopsis baichengensis RepID=UPI000345FC0F
Glycine cleavage system protein T {ECO:0000313|EMBL:KEI44548.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
Glycine cleavage system T protein (aminomethyltransferase)
PLM3_60_coex_sep16_scaffold_1982_7
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(4916..5911)
DNA (996bp) protein (332aa)
etfA3; electron transfer flavor protein alpha subunit-like protein; K03522 electron transfer flavoprotein alpha subunit bin=bin8_Chloro species=Haloarcula hispanica genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin8_Chloro organism_group=Chloroflexi
electron transfer flavoprotein, alpha subunit
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_1982_8
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(5908..6663)
DNA (756bp) protein (252aa)
electron transfer flavoprotein, beta subunit bin=bin8_Chloro species=Natronococcus occultus genus=Natronococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin8_Chloro organism_group=Chloroflexi
electron transfer flavoprotein, beta subunit
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_1982_9
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(6666..9188)
DNA (2523bp) protein (841aa)
glycine cleavage T protein (aminomethyl transferase) bin=bin8_Chloro species=Brevibacterium linens genus=Brevibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
glycine cleavage T protein (aminomethyl transferase)
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_1982_10
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9396..10394)
DNA (999bp) protein (333aa)
hypothetical protein Tax=Nocardiopsis alba RepID=UPI000363AE9E
substrate binding domain of ABC-type glycine betaine transport system family protein
Substrate binding domain of ABC-type glycine betaine transport system family protein {ECO:0000313|EMBL:AFR06315.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
PLM3_60_coex_sep16_scaffold_1982_11
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10391..12385)
DNA (1995bp) protein (665aa)
glycine/betaine ABC transporter permease Tax=Streptomyces RepID=UPI00036CB619
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:EYU71372.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_1982_12

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comp(12385..13425)
DNA (1041bp) protein (347aa)
glycine/betaine ABC transporter ATP-binding protein Tax=Streptomyces sp. CNS615 RepID=UPI0003672B96
Uncharacterized protein {ECO:0000313|EMBL:KGA19318.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
putative glycine betaine ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_1982_13
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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13694..14554
DNA (861bp) protein (287aa)
Choline dehydrogenase {ECO:0000256|RuleBase:RU003969}; EC=1.1.99.1 {ECO:0000256|RuleBase:RU003969};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
choline dehydrogenase Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003732797
choline dehydrogenase
Displaying 13 items

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