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PLM3_60_coex_sep16_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_108_1
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1377
DNA (1377bp) protein (459aa)
h16_A1706; S08A subfamily peptidase (EC:3.4.21.-)
Putative peptidase, S08A subfamily {ECO:0000313|EMBL:CAJ92830.1}; EC=3.4.21.- {ECO:0000313|EMBL:CAJ92830.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Putative peptidase, S08A subfamily Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KAZ1_CUPNH
PLM3_60_coex_sep16_scaffold_108_2
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1361..2650)
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W2M1_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_108_3
unknown

Not on your lists

comp(2813..3268)
DNA (456bp) protein (152aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3408..4415
DNA (1008bp) protein (336aa)
DNA polymerase IV Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T7P3_AMYOR
dinB; DNA polymerase IV
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(4437..5153)
DNA (717bp) protein (239aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=Saccharomonospora marina XMU15 RepID=H5WYW0_9PSEU
two-component response regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_6
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5374..6384)
DNA (1011bp) protein (337aa)
Kelch repeat type 1-containing protein {ECO:0000313|EMBL:ETK28278.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25719.;"
Kelch repeat type 1-containing protein
Kelch repeat-containing protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
PLM3_60_coex_sep16_scaffold_108_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6648..6854
DNA (207bp) protein (69aa)
hypothetical protein; K03704 cold shock protein (beta-ribbon, CspA family) bin=RBG_19FT_COMBO_GAL15_69_19 species=Pseudomonas veronii genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cold-shock protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_8
unknown

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7018..7236
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(7259..8677)
DNA (1419bp) protein (473aa)
Putative cell envelope-related function transcriptional attenuator common domain protein Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZU7_9ACTO
cell envelope-related transcriptional attenuator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_10
unknown

Not on your lists

8815..9003
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9014..9220)
DNA (207bp) protein (69aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9401..9646)
DNA (246bp) protein (82aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9692..10372
DNA (681bp) protein (227aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

10449..11450
DNA (1002bp) protein (334aa)
Pirin domain-containing protein; K06911 bin=bin8_Chloro species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Pirin domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_60_coex_sep16_scaffold_108_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11493..11813)
DNA (321bp) protein (107aa)
putative transcriptional regulator with C-terminal CBS domains bin=GWC2_Chloroflexi_73_18 species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
XRE family transcriptional regulator
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_coex_sep16_scaffold_108_16
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

12088..13017
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D547_PELTS
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_60_coex_sep16_scaffold_108_17
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13121..13987
DNA (867bp) protein (289aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003782745
MmcJ protein
MmcJ {ECO:0000313|EMBL:AEF40750.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
PLM3_60_coex_sep16_scaffold_108_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14002..15141
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003788C93
putative dipeptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_108_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15289..15723)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUE7_PSEUX
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_60_coex_sep16_scaffold_108_20
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15720..16325)
DNA (606bp) protein (202aa)
ArsR family transcriptional regulator Tax=Streptomyces vitaminophilus RepID=UPI000363791E
ArsR family transcriptional regulator {ECO:0000313|EMBL:EOD64366.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
ArsR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_108_21
unknown

Not on your lists

16557..16667
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16724..17071
DNA (348bp) protein (116aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_23
unknown

Not on your lists

comp(17089..17238)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_24
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17530..18282)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00037A42C1
Luciferase {ECO:0000313|EMBL:KKA38626.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_108_25
unknown

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18398..18766
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_26
unknown

Not on your lists

18709..18966
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18992..19546)
DNA (555bp) protein (185aa)
GCN5 family acetyltransferase Tax=Streptomyces sp. SA3_actG RepID=UPI0001FFF8C0
N-acetyltransferase GCN5
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_108_28
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19848..20288
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RIM4_BLASD
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02218.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3_60_coex_sep16_scaffold_108_29
unknown

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20303..20476
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_108_30
unknown

Not on your lists

comp(20510..20917)
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying items 1-30 of 62 in total

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