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PLM3_60_coex_sep16_scaffold_1306_12

Organism: PLM3_60_coex_sep16_Actinobacteria_69_7

near complete RP 49 / 55 BSCG 49 / 51 MC: 2 ASCG 13 / 38
Location: 9588..10283

Top 3 Functional Annotations

Value Algorithm Source
putative two-component system response regulator bin=RBG_19FT_COMBO_GAL15_69_19 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 223.0
  • Bit_score: 362
  • Evalue 1.70e-97
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 229.0
  • Bit_score: 266
  • Evalue 4.80e-69
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEH07871.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 229.0
  • Bit_score: 266
  • Evalue 2.40e-68

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGGAGCCGTGAACGCGACGAGGGTCCTGGTCGTCGACGACGAGCCGATGGTCCGCGAGGTGCTCGCCCGGTACCTCGCGAAGGAGGGCTACACCGTCGACGTGGCGGAGGACGGCGAGCAGGCGCTCGCCGTCTACGCGCGAGCGCTGCCCGACCTGGTCCTGCTCGACCTCATGCTTCCGCGCATCGACGGCCTCGAGGTGTTCCGCAGGATCCGCGAGCAGGCACCGACCGCCGTGATCATGCTCACGGCCAGAGGCGAGGAGACCGACCGCGTGGTCGGCCTCGAGCTTGGGGCCGACGACTACGTGACCAAACCGTTCTCGCCGCGCGAGGTCGTGGCGCGCGTCCGCGCCGTGCTGCGACGTTCGGCGACGGCGACGAGCGAGCCACGCCGCGTCGTCACCGCCGGCGATCTGGAGGTCGACGGGCCCAGACGCGAGCTCCGGCGTGGCGGCGCGCCGGTCCGGCTCACCCGCAAGGAGTTCGACCTTCTCTACCTCCTGGCCTCGAACCCAGGCCGGGCGTTCACTCGTTCCGAACTCCTCGAAGACGTGTGGGACTTCGCGTGGGACGGCGACACGGCGACGGTGACCGTGCATGTGCGCCGCGTCCGCGAGAAGATCGAAGACGATCCGTCGAACCCCGCGCACCTGATGACGGTGTGGGGCGTCGGGTACCGGTTCGACCCATGA
PROTEIN sequence
Length: 232
MGAVNATRVLVVDDEPMVREVLARYLAKEGYTVDVAEDGEQALAVYARALPDLVLLDLMLPRIDGLEVFRRIREQAPTAVIMLTARGEETDRVVGLELGADDYVTKPFSPREVVARVRAVLRRSATATSEPRRVVTAGDLEVDGPRRELRRGGAPVRLTRKEFDLLYLLASNPGRAFTRSELLEDVWDFAWDGDTATVTVHVRRVREKIEDDPSNPAHLMTVWGVGYRFDP*