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PLM3_60_coex_sep16_scaffold_1306

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1306_1
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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2..928
DNA (927bp) protein (309aa)
aminopeptidase (EC:3.4.13.9)
Putative aminopeptidase putative Proline or Methionine dipeptidase Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z236_BRASO
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3_60_coex_sep16_scaffold_1306_2
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

955..1956
DNA (1002bp) protein (334aa)
pyruvate dehydrogenase (EC:1.2.4.1)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00038081D6
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_1306_3
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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1944..2918
DNA (975bp) protein (325aa)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EI12_9RHIZ
acetoin dehydrogenase E1 component subunit beta
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_60_coex_sep16_scaffold_1306_4
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2975..4345
DNA (1371bp) protein (457aa)
Putative Imidazolonepropionase Tax=Streptomyces viridochromogenes Tue57 RepID=L8PNX4_STRVR
Putative Imidazolonepropionase {ECO:0000313|EMBL:ELS58180.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_1306_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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4342..4827
DNA (486bp) protein (162aa)
Cupin 2, conserved barrel domain protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTQ4_ACIC1
cupin
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ABK52814.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_60_coex_sep16_scaffold_1306_6
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4788..5180
DNA (393bp) protein (131aa)
Cupin 2 domain-containing protein Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X8N4_STRVR
Cupin {ECO:0000313|EMBL:KKD08790.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
cupin
PLM3_60_coex_sep16_scaffold_1306_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5177..5878
DNA (702bp) protein (234aa)
Short-chain dehydrogenase/reductase SDR bin=GWF2_Methylomirabilis_70_14 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_1306_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5910..6794
DNA (885bp) protein (295aa)
6-phosphogluconate dehydrogenase, NAD-binding protein bin=GWF2_Methylomirabilis_70_14 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
6-phosphogluconate dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_1306_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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6875..7675
DNA (801bp) protein (267aa)
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZ19_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_coex_sep16_scaffold_1306_10
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(7684..8367)
DNA (684bp) protein (228aa)
Haloacid dehalogenase, type II Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ20_ROSS1
type II haloacid dehalogenase
Haloacid dehalogenase, type II {ECO:0000313|EMBL:ABQ91873.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3_60_coex_sep16_scaffold_1306_11
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8406..8945)
DNA (540bp) protein (180aa)
Secreted protein Tax=Streptomyces RepID=S1SPH1_STRLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ18303.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM3_60_coex_sep16_scaffold_1306_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9588..10283
DNA (696bp) protein (232aa)
putative two-component system response regulator bin=RBG_19FT_COMBO_GAL15_69_19 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEH07871.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_1306_13
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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10280..11488
DNA (1209bp) protein (403aa)
integral membrane sensor signal transduction histidine kinase bin=RBG_19FT_COMBO_GAL15_69_19 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
integral membrane sensor signal transduction histidine kinase
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3_60_coex_sep16_scaffold_1306_14
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11568..13202
DNA (1635bp) protein (545aa)
oxidoreductase Tax=Streptomyces sp. ATexAB-D23 RepID=UPI00036A044A
probable sulfite oxidase
Probable sulfite oxidase {ECO:0000313|EMBL:CCA53687.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM3_60_coex_sep16_scaffold_1306_15
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13246..13842
DNA (597bp) protein (199aa)
Putative lipoprotein Tax=Janibacter sp. HTCC2649 RepID=A3TPI9_9MICO
Fasciclin {ECO:0000313|EMBL:KGN36215.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
beta-Ig-H3/fasciclin
PLM3_60_coex_sep16_scaffold_1306_16
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

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comp(13906..15228)
DNA (1323bp) protein (441aa)
C69 family peptidase; K03592 PmbA protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Uncharacterized protein {ECO:0000313|EMBL:KIE48576.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
peptidase U62 modulator of DNA gyrase
PLM3_60_coex_sep16_scaffold_1306_17
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(15233..16618)
DNA (1386bp) protein (462aa)
Putative peptidase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z7S2_9ACTN
Putative peptidase {ECO:0000313|EMBL:CCM66002.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
peptidase U62 family protein
PLM3_60_coex_sep16_scaffold_1306_18
unknown

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16679..17266
DNA (588bp) protein (196aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1306_19
unknown

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17337..19082
DNA (1746bp) protein (582aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1306_20
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18981..20489)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2V4_ACIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU53348.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
PLM3_60_coex_sep16_scaffold_1306_21
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20538..21332)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VC26_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ69842.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
PLM3_60_coex_sep16_scaffold_1306_22
unknown

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21887..22192
DNA (306bp) protein (102aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1306_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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22189..23307
DNA (1119bp) protein (373aa)
Endoglucanase Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I0V5_AZOC5
endoglucanase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 23 items

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